RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 ZBTB44Q8NCP5 570 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 GSTCDQ8NEC7 633 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 FGF13Q92913 245 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 KCNB2Q92953 911 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 LTB4R2Q9NPC1 389 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 CDV3Q9UKY7 258 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 SMG5Q9UPR3 1016 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 FANCMQ8IYD8 2048 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 FAM170BA6NMN3 283 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 PRR5-ARHGAP8B1AHC4 643 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 XYLBO75191 536 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 DEXIO95424 95 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 ARF4P18085 180 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 RPS6KB1P23443 525 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 AKAP5P24588 427 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 EVCP57679 992 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 NTHL1P78549 312 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 ARHGAP8P85298 464 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 MBTD1Q05BQ5 628 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 POU5F1BQ06416 359 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 SSRP1Q08945 709 aaKnown RBP13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 HSP90AA2PQ14568 343 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 EPHA7Q15375 998 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 NPY5RQ15761 445 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 AMHR2Q16671 573 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 RTP2Q5QGT7 225 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 PIK3R5Q8WYR1 880 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 EPC1Q9H2F5 836 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 ZSWIM4Q9H7M6 989 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 ZSCAN32Q9NX65 697 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 POLIQ9UNA4 740 aa13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 MTF2Q9Y483 593 aaPredicted RBP13.12□□□□□ -0.31
GTF3C1-209ENST00000568569 CCL16O15467 120 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 CDC45O75419 566 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 KRT37O76014 449 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 POU2F2P09086 479 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 ATXN1P54253 815 aaKnown RBP13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 PPP4R3AQ6IN85 833 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 SLC27A1Q6PCB7 646 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 RABGGTAQ92696 567 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 NELL2Q99435 816 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 TTPALQ9BTX7 342 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 PHF20Q9BVI0 1012 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 NFKBIZQ9BYH8 718 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 XPNPEP1Q9NQW7 623 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 RGL1Q9NZL6 768 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 KLK14Q9P0G3 267 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 CFAP47Q6ZTR5 3102 aa13.11□□□□□ -0.31
GTF3C1-209ENST00000568569 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 CPLX1O14810 134 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 TBX3O15119 743 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 NCAM2O15394 837 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 LILRB5O75023 590 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 NPTXRO95502 500 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 CD72P21854 359 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 PSMA5P28066 241 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 HSPA4P34932 840 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 IRX6P78412 446 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 CYP4A11Q02928 519 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 TUSC3Q13454 348 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 CAPSQ13938 189 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 PSMD5Q16401 504 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 FAM171A1Q5VUB5 890 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 NCAPH2Q6IBW4 605 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 PDXDC1Q6P996 788 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 TPRG1Q6ZUI0 275 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 NEK8Q86SG6 692 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 CEP57Q86XR8 500 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 NPAS3Q8IXF0 933 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 ITFG1Q8TB96 612 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 LNX1Q8TBB1 728 aaPredicted RBP13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 SLC7A14Q8TBB6 771 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 HASPINQ8TF76 798 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 NELL1Q92832 810 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 CLDN23Q96B33 292 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 KXD1Q9BQD3 176 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 CLSTN3Q9BQT9 956 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 PAAF1Q9BRP4 392 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 CACNG4Q9UBN1 327 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 PARP2Q9UGN5 583 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 KCNH3Q9ULD8 1083 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 USP18Q9UMW8 372 aa13.1□□□□□ -0.31
GTF3C1-209ENST00000568569 KMT2BQ9UMN6 2715 aaPredicted RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 A0A1B0GUA9 196 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 CASTOR2A6NHX0 329 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 ZBTB39O15060 712 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 B4GALT5O43286 388 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 MARCH6O60337 910 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 TBC1D4O60343 1298 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 CCNT1O60563 726 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 DGAT1O75907 488 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 KIF4AO95239 1232 aa13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 TARSP26639 723 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 RPS9P46781 194 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 ELAVL2Q12926 359 aaKnown RBP13.09□□□□□ -0.31
GTF3C1-209ENST00000568569 CTTNQ14247 550 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms