RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TNFSF9P41273 254 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 PSMC4P43686 418 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 WNT7BP56706 349 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 ZNF568Q3ZCX4 644 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 MTHFD1LQ6UB35 978 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 ZPBP2Q6X784 338 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 SOCS4Q8WXH5 440 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 NT5C1BQ96P26 610 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 MAP7D2Q96T17 732 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 APBA2Q99767 749 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 CARD6Q9BX69 1037 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 PACSIN1Q9BY11 444 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 AP5M1Q9H0R1 490 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 MINDY3Q9H8M7 445 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 MYO1AQ9UBC5 1043 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 MYO6Q9UM54 1294 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 CEP350Q5VT06 3117 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 ASAP2O43150 1006 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 CA12O43570 354 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 MOCS3O95396 460 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 MYL3P08590 195 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 CCDC172P0C7W6 258 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 ZNF865P0CJ78 1059 aaPredicted RBP7.64□□□□□ -1.19
SMG1-215ENST00000568239 CTGFP29279 349 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 PHKA2P46019 1235 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 PTENP60484 403 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 ATF7IP2Q5U623 682 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 CDCA2Q69YH5 1023 aaPredicted RBP7.64□□□□□ -1.19
SMG1-215ENST00000568239 ALKBH5Q6P6C2 394 aaKnown RBP7.64□□□□□ -1.19
SMG1-215ENST00000568239 CRELD2Q6UXH1 353 aaPredicted RBP7.64□□□□□ -1.19
SMG1-215ENST00000568239 GLYCTKQ8IVS8 523 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 TXLNBQ8N3L3 684 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 U2AF1L4Q8WU68 220 aaKnown RBP7.64□□□□□ -1.19
SMG1-215ENST00000568239 ACO2Q99798 780 aaKnown RBP7.64□□□□□ -1.19
SMG1-215ENST00000568239 L2HGDHQ9H9P8 463 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 STYXL1Q9Y6J8 313 aa7.64□□□□□ -1.19
SMG1-215ENST00000568239 ACKR2O00590 384 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 DYNC1I1O14576 645 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 KIAA0391O15091 583 aaKnown RBP7.63□□□□□ -1.19
SMG1-215ENST00000568239 AOC2O75106 756 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 LCA5LO95447 670 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 PIGRP01833 764 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 HOXC6P09630 235 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 PIK3CAP42336 1068 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 RBM10P98175 930 aaKnown RBP7.63□□□□□ -1.19
SMG1-215ENST00000568239 PSMD6Q15008 389 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 CEP120Q8N960 986 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 LRRN4CLQ8ND94 238 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 ZNF516Q92618 1163 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 TATDN2Q93075 761 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 CCDC113Q9H0I3 377 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 HDAC6Q9UBN7 1215 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 GJD2Q9UKL4 321 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 GNEQ9Y223 722 aaKnown RBP7.63□□□□□ -1.19
SMG1-215ENST00000568239 PTPRJQ12913 1337 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 TACC1O75410 805 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 TFRCP02786 760 aaKnown RBP7.63□□□□□ -1.19
SMG1-215ENST00000568239 C6orf222P0C671 652 aaPredicted RBP7.63□□□□□ -1.19
SMG1-215ENST00000568239 IQCF3P0C7M6 154 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 KRT5P13647 590 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 TNFAIP3P21580 790 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 RFX1P22670 979 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 GTF2H1P32780 548 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 NOP2P46087 812 aaKnown RBP7.63□□□□□ -1.19
SMG1-215ENST00000568239 DNA2P51530 1060 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 MFAP3P55082 362 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 FCGRTP55899 365 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 MBTD1Q05BQ5 628 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 KIZQ2M2Z5 673 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 WDR44Q5JSH3 913 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 TAF3Q5VWG9 929 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 NFRKBQ6P4R8 1299 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 CPB2Q96IY4 423 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 ALS2CR12Q96Q35 445 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 GPR88Q9GZN0 384 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 IFT122Q9HBG6 1241 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 ACP6Q9NPH0 428 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 C1orf112Q9NSG2 853 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 PUF60Q9UHX1 559 aaKnown RBP7.63□□□□□ -1.19
SMG1-215ENST00000568239 NAGPAQ9UK23 515 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 MRFAP1Q9Y605 127 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 CAPN6Q9Y6Q1 641 aa7.63□□□□□ -1.19
SMG1-215ENST00000568239 A6NJR5 290 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 RBAK-RBAKDNI3L0D1 243 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 OGTO15294 1046 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 CYP26A1O43174 497 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 ERLIN2O94905 339 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 ATP1A1P05023 1023 aaKnown RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 GTF2F1P35269 517 aaKnown RBP eCLIP7.62□□□□□ -1.19
SMG1-215ENST00000568239 PRKCIP41743 596 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 TM4SF4P48230 202 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 GPC3P51654 580 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 TFAMQ00059 246 aaKnown RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 TDRD10Q5VZ19 366 aaKnown RBP7.62□□□□□ -1.19
SMG1-215ENST00000568239 EEF1DP3Q658K8 133 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 SPOPLQ6IQ16 392 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 MPZL3Q6UWV2 235 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 OR5B17Q8NGF7 314 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 LMBR1Q8WVP7 490 aa7.62□□□□□ -1.19
SMG1-215ENST00000568239 DHX38Q92620 1227 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms