RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 MAGEA4P43358 317 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 RIPK1Q13546 671 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 KPNB1Q14974 876 aaKnown RBP11.6□□□□□ -0.55
PALB2-206ENST00000568219 RABGAP1LQ5R372 815 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 PIGWQ7Z7B1 504 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 CCNJLQ8IV13 435 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 MAB21L3Q8N8X9 362 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 FAM13CQ8NE31 585 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ZSWIM1Q9BR11 485 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 APEX2Q9UBZ4 518 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 PDXKO00764 312 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 LCA5LO95447 670 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 TTC4O95801 387 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 CHKAP35790 457 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
PALB2-206ENST00000568219 ATXN3P54252 364 aaPredicted RBP11.6□□□□□ -0.55
PALB2-206ENST00000568219 BNIP1Q12981 228 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 MIGA2Q7L4E1 593 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ECHDC2Q86YB7 292 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 RBBP8NLQ8NC74 664 aaPredicted RBP11.6□□□□□ -0.55
PALB2-206ENST00000568219 PRPF31Q8WWY3 499 aaKnown RBP11.6□□□□□ -0.55
PALB2-206ENST00000568219 C11orf70Q9BRQ4 267 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 RUSC1Q9BVN2 902 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 PREX1Q8TCU6 1659 aa11.6□□□□□ -0.55
PALB2-206ENST00000568219 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 C5orf60A6NFR6 353 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 PYGLP06737 847 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 ITIH2P19823 946 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 RASA1P20936 1047 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 ALDH18A1P54886 795 aaKnown RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 ROR2Q01974 943 aaKnown RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 PPP1R15BQ5SWA1 713 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 CASC4Q6P4E1 433 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 ZNF572Q7Z3I7 529 aaPredicted RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 CATSPER3Q86XQ3 398 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 RNF168Q8IYW5 571 aaPredicted RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 CPA5Q8WXQ8 436 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 MAGEB18Q96M61 343 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 NAP1L4Q99733 375 aaKnown RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 CYP39A1Q9NYL5 469 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 SLC12A4Q9UP95 1085 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 FLT1P17948 1338 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 ARHGAP4P98171 946 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 DDB1Q16531 1140 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 EDRF1Q3B7T1 1238 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 DAB2IPQ5VWQ8 1189 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 TBC1D9BQ66K14 1250 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 CKAP2Q8WWK9 683 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 ATXN2LQ8WWM7 1075 aaKnown RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 TRAIPQ9BWF2 469 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 IFT122Q9HBG6 1241 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 MAD1L1Q9Y6D9 718 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 PALM3A6NDB9 673 aaPredicted RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 O00370 1275 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 AHCYL1O43865 530 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 TOM1L1O75674 476 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 NCF2P19878 526 aaPredicted RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 PHBP35232 272 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.555e-6■■■□□ 14.9
PALB2-206ENST00000568219 ARSEP51690 589 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 MFAP3P55082 362 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 SH2D4BQ5SQS7 431 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 UBAP2Q5T6F2 1119 aaKnown RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 FAM102BQ5T8I3 360 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 TXNRD3Q86VQ6 643 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 PALB2Q86YC2 1186 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 BBOF1Q8ND07 529 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 ACSF2Q96CM8 615 aaPredicted RBP11.59□□□□□ -0.55
PALB2-206ENST00000568219 TLCD1Q96CP7 247 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 TMEM117Q9H0C3 514 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 GANQ9H2C0 597 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 NEU2Q9Y3R4 380 aa11.59□□□□□ -0.55
PALB2-206ENST00000568219 ERVV-1B6SEH8 477 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 ANKRD63C9JTQ0 380 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 CALCAP01258 141 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 STAT4Q14765 748 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 ASPRV1Q53RT3 343 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 SLFN13Q68D06 897 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 BTNL9Q6UXG8 535 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 IZUMO2Q6UXV1 221 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 ATL2Q8NHH9 583 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 CHST7Q9NS84 486 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
PALB2-206ENST00000568219 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 ABCB11O95342 1321 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 CFLARO15519 480 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 ZWINTO95229 277 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 SGPL1O95470 568 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 RALAP11233 206 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 GSTT1P30711 240 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 RRP1BQ14684 758 aaKnown RBP11.58□□□□□ -0.56
PALB2-206ENST00000568219 PPP2R5DQ14738 602 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 ZNF394Q53GI3 561 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 LNX1Q8TBB1 728 aaPredicted RBP11.58□□□□□ -0.56
PALB2-206ENST00000568219 NT5C1BQ96P26 610 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 ANLNQ9NQW6 1124 aa11.58□□□□□ -0.56
PALB2-206ENST00000568219 CNOT7Q9UIV1 285 aaKnown RBP11.58□□□□□ -0.56
PALB2-206ENST00000568219 MEGF6O75095 1541 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms