RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MCL1Q07820 350 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 TUSC3Q13454 348 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 PKP1Q13835 747 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SMC1AQ14683 1233 aaKnown RBP8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SMAD2Q15796 467 aaKnown RBP8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 E2F4Q16254 413 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SPECC1Q5M775 1068 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 KIAA0319Q5VV43 1072 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 CCDC73Q6ZRK6 1079 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 TMC7Q7Z402 723 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 HAUS6Q7Z4H7 955 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 APBB1IPQ7Z5R6 666 aaPredicted RBP8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 GPBP1Q86WP2 473 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 FAM178BQ8IXR5 827 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 VPS52Q8N1B4 723 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SMRP1Q8NCR6 262 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 ADAMTS19Q8TE59 1207 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SLC22A17Q8WUG5 538 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 PPP1R10Q96QC0 940 aaKnown RBP8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 TARS2Q9BW92 718 aaKnown RBP8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 CDT1Q9H211 546 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 S1PR5Q9H228 398 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 CXCL16Q9H2A7 254 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 TLE6Q9H808 572 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 PARVGQ9HBI0 331 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 RXFP1Q9HBX9 757 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 KBTBD4Q9NVX7 518 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 CLDND1Q9NY35 253 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SNTG2Q9NY99 539 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 PRKAG3Q9UGI9 489 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 INPP5FQ9Y2H2 1132 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 USP20Q9Y2K6 914 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 STYXL1Q9Y6J8 313 aa8.99□□□□□ -0.97
HDGFL3-205ENST00000568129 SCN1AP35498 2009 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 BDP1A6H8Y1 2624 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 MYMKA6NI61 221 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 MEFVO15553 781 aaPredicted RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 MBTPS2O43462 519 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 TRAK2O60296 914 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 CUTAO60888 179 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 CLASP2O75122 1294 aaKnown RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 CXCL14O95715 111 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 THP07101 528 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 KCNE1P15382 129 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 HOXB8P17481 243 aaPredicted RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 POU5F1Q01860 360 aaKnown RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 CEBPZQ03701 1054 aaKnown RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 SMAD4Q13485 552 aaKnown RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 BMS1Q14692 1282 aaKnown RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 ZRSR1Q15695 479 aaKnown RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 RRAGBQ5VZM2 374 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 PTCRAQ6ISU1 281 aaPredicted RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 MPZL3Q6UWV2 235 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 CD300LGQ6UXG3 332 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 ZNF720Q7Z2F6 126 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 MICAL1Q8TDZ2 1067 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 SUSD6Q92537 303 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 FAM193BQ96PV7 902 aaPredicted RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 TSPAN18Q96SJ8 248 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 UHRF1Q96T88 793 aaPredicted RBP8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 HERC2P3Q9BVR0 1158 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 COLEC11Q9BWP8 271 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 HAPLN2Q9GZV7 340 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 CUEDC2Q9H467 287 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 KLK14Q9P0G3 267 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 SEL1LQ9UBV2 794 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 PARP2Q9UGN5 583 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 TBX20Q9UMR3 447 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 SSX2IPQ9Y2D8 614 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 NOTCH4Q99466 2003 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 DOCK8Q8NF50 2099 aa8.98□□□□□ -0.97
HDGFL3-205ENST00000568129 A0A0B4J269 797 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 SMIM28A0A1B0GU29 152 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 H3BQ06 376 aaPredicted RBP8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 TNFRSF10AO00220 468 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 PER2O15055 1255 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 SSBP05455 408 aaKnown RBP eCLIP8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 TXLNAP40222 546 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 DSG1Q02413 1049 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 RAD51AP2Q09MP3 1159 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 STK38Q15208 465 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 PTPN14Q15678 1187 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 ZBTB6Q15916 424 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 KYAT1Q16773 422 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 PLPP4Q5VZY2 271 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 ANKRD54Q6NXT1 300 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 SLC39A4Q6P5W5 647 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 SYCE2Q6PIF2 218 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 SHC4Q6S5L8 630 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 SV2BQ7L1I2 683 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 TAS1R1Q7RTX1 841 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 RBM23Q86U06 439 aaKnown RBP8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 MAP4K3Q8IVH8 894 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 CEP120Q8N960 986 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 KCNG4Q8TDN1 519 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 DDX12PQ92771 950 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 HVCN1Q96D96 273 aa8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 ZBTB45Q96K62 511 aaPredicted RBP8.97□□□□□ -0.97
HDGFL3-205ENST00000568129 ZMAT2Q96NC0 199 aaKnown RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms