RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CCDC191Q8NCU4 936 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 TTLL11Q8NHH1 800 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 PIP4K2CQ8TBX8 421 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 TOE1Q96GM8 510 aaKnown RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 ZNF496Q96IT1 587 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 MYD88Q99836 296 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 LLPHQ9BRT6 129 aaKnown RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 DHRS4Q9BTZ2 278 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 C11orf84Q9BUA3 381 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 HELLSQ9NRZ9 838 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 CWC25Q9NXE8 425 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 MRPS23Q9Y3D9 190 aaKnown RBP6.11□□□□□ -1.43
CAPN3-217ENST00000567817 FPGT-TNNI3KV9GXZ4 949 aa6.11□□□□□ -1.43
CAPN3-217ENST00000567817 TRIOBPQ9H2D6 2365 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 GOLGA6L6A8MZA4 724 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 H7C1D1 291 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 TAF5LO75529 589 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 OFD1O75665 1012 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 MAP4K4O95819 1239 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 ZFYP08048 801 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 CCDC192P0DO97 292 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 GNAT1P11488 350 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 HOXA5P20719 270 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 GJB2P29033 226 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 STAT5AP42229 794 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 RFX5P48382 616 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 SLURP1P55000 103 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 ITGA1P56199 1179 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 AIMP1Q12904 312 aaKnown RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 HSP90AB3PQ58FF7 597 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 TTLL7Q6ZT98 887 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 MTDHQ86UE4 582 aaKnown RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 FBXL16Q8N461 479 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 KBTBD3Q8NAB2 608 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 UHMK1Q8TAS1 419 aaKnown RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 KISS1RQ969F8 398 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 DNAJC7Q99615 494 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 NYXQ9GZU5 481 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 IL25Q9H293 177 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 ZSCAN16Q9H4T2 348 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 DDX19AQ9NUU7 478 aaKnown RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 SPATA6Q9NWH7 488 aaPredicted RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 NTMQ9P121 344 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 CFAP45Q9UL16 551 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 PA2G4Q9UQ80 394 aaKnown RBP6.1□□□□□ -1.43
CAPN3-217ENST00000567817 MTMR6Q9Y217 621 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 ZKSCAN5Q9Y2L8 839 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 TRAF6Q9Y4K3 522 aa6.1□□□□□ -1.43
CAPN3-217ENST00000567817 A0A1W2PPC1 479 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 GOLGA6L4A6NEF3 574 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 WNT9AO14904 365 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 PPIP5K2O43314 1243 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 MYL6BP14649 208 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 THBS2P35442 1172 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 KCNC1P48547 511 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 GMPSP49915 693 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-217ENST00000567817 PTH1RQ03431 593 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 SREBF2Q12772 1141 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 ME3Q16798 604 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 NOL8Q76FK4 1167 aaKnown RBP6.09□□□□□ -1.43
CAPN3-217ENST00000567817 KRT26Q7Z3Y9 468 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 MTERF4Q7Z6M4 381 aaKnown RBP6.09□□□□□ -1.43
CAPN3-217ENST00000567817 CCDC83Q8IWF9 413 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 CARFQ8N187 725 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 ZSWIM2Q8NEG5 633 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 THAP3Q8WTV1 239 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-217ENST00000567817 DPF2Q92785 391 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 DRC1Q96MC2 740 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 NAP1L5Q96NT1 182 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-217ENST00000567817 NEK1Q96PY6 1258 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 PLA2G12BQ9BX93 195 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 CCDC8Q9H0W5 538 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-217ENST00000567817 XYLT2Q9H1B5 865 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 BOLA2Q9H3K6 86 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 IPPKQ9H8X2 491 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 HSPBP1Q9NZL4 362 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 USP25Q9UHP3 1055 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 CTNNA3Q9UI47 895 aa6.09□□□□□ -1.43
CAPN3-217ENST00000567817 DBNLQ9UJU6 430 aaKnown RBP6.09□□□□□ -1.43
CAPN3-217ENST00000567817 COL4A5P29400 1685 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 CCDC163A0A0D9SF12 145 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 A0A0D9SFI3 127 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 A0A1B0GTL3 188 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 PRAMEF22A3QJZ6 481 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 EYA2O00167 538 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 CTAGE5O15320 804 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 DHX16O60231 1041 aaKnown RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 PTMAP06454 111 aaKnown RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 RPS12P25398 132 aaKnown RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 RPL13P26373 211 aaKnown RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 SARSP49591 514 aaKnown RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 CXCL9Q07325 125 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 KIAA2012Q0VF49 1180 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 PAK1Q13153 545 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 SLC39A6Q13433 755 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 SMAD4Q13485 552 aaKnown RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 C2orf27AQ580R0 203 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 NAA16Q6N069 864 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 TEPPQ6URK8 271 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 UBE3BQ7Z3V4 1068 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms