RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 KLHL5Q96PQ7 755 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 PNMA5Q96PV4 448 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 RPS6KC1Q96S38 1066 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 ACO2Q99798 780 aaKnown RBP7.61□□□□□ -1.19
SF3B3-209ENST00000567635 LRFN3Q9BTN0 628 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 KIFC3Q9BVG8 833 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 RUSC1Q9BVN2 902 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 APOL5Q9BWW9 433 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 ADAM7Q9H2U9 754 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 KMT5AQ9NQR1 393 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 DZANK1Q9NVP4 752 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 SNTG2Q9NY99 539 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 KCND2Q9NZV8 630 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 TNFSF13BQ9Y275 285 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 PRG3Q9Y2Y8 225 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-209ENST00000567635 HCFC2Q9Y5Z7 792 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 ZDBF2Q9HCK1 2354 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 DOCK8Q8NF50 2099 aa7.61□□□□□ -1.19
SF3B3-209ENST00000567635 SPTBN5Q9NRC6 3674 aaKnown RBP7.6□□□□□ -1.19
SF3B3-209ENST00000567635 C2CD2LO14523 706 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 SLC16A4O15374 487 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 DCXO43602 365 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 EFEMP2O95967 443 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 EDN1P05305 212 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 URODP06132 367 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 CNPP09543 421 aaKnown RBP7.6□□□□□ -1.19
SF3B3-209ENST00000567635 PLS3P13797 630 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 EPCAMP16422 314 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 COL9A1P20849 921 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 SYT1P21579 422 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 MTHFRP42898 656 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 SLC12A3P55017 1021 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 RAD51AP2Q09MP3 1159 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 MAPK7Q13164 816 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 TUSC3Q13454 348 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 SF3A1Q15459 793 aaKnown RBP7.6□□□□□ -1.19
SF3B3-209ENST00000567635 USP41Q3LFD5 358 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 TMEM119Q4V9L6 283 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 ARSHQ5FYA8 562 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 HERC4Q5GLZ8 1057 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-209ENST00000567635 ATAT1Q5SQI0 421 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 KIAA0319Q5VV43 1072 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 C12orf76Q8N812 135 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-209ENST00000567635 SPIRE2Q8WWL2 714 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 RABGGTAQ92696 567 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 RPGRIP1Q96KN7 1286 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 RIPOR3Q96MK2 946 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 NECTIN4Q96NY8 510 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 TCHPQ9BT92 498 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 HERC2P3Q9BVR0 1158 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 MRPL4Q9BYD3 311 aaKnown RBP7.6□□□□□ -1.19
SF3B3-209ENST00000567635 MARCH5Q9NX47 278 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 ARHGAP28Q9P2N2 729 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 ADAM28Q9UKQ2 775 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 GDAQ9Y2T3 454 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 TCHHQ07283 1943 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 MYH15Q9Y2K3 1946 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 ANK1P16157 1881 aa7.6□□□□□ -1.19
SF3B3-209ENST00000567635 NPHP3-ACAD11A0A0J9YXS1 232 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 FAM86C2PA6NEL3 165 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 F8W810 466 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 K7ELQ4 463 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-209ENST00000567635 PTGESO14684 152 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 RECQL4O94761 1208 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 ADH1AP07327 375 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 GLUD2P49448 558 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 CLCN4P51793 760 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 YARSP54577 528 aaKnown RBP7.59□□□□□ -1.19
SF3B3-209ENST00000567635 DSG1Q02413 1049 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 STRN3Q13033 797 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 HSP90AA2PQ14568 343 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-209ENST00000567635 RARS2Q5T160 578 aaKnown RBP7.59□□□□□ -1.19
SF3B3-209ENST00000567635 KANK3Q6NY19 840 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 ALKAL1Q6UXT8 129 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 TAS1R3Q7RTX0 852 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 ZBTB33Q86T24 672 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 GPR65Q8IYL9 337 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 RNF168Q8IYW5 571 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-209ENST00000567635 FBXL18Q96ME1 805 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 CCDC94Q9BW85 323 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-209ENST00000567635 TARS2Q9BW92 718 aaKnown RBP7.59□□□□□ -1.19
SF3B3-209ENST00000567635 GPR62Q9BZJ7 368 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 CXCL16Q9H2A7 254 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 RXFP1Q9HBX9 757 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 PTPRHQ9HD43 1115 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 C11orf16Q9NQ32 467 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 CHST7Q9NS84 486 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 LARSQ9P2J5 1176 aaKnown RBP7.59□□□□□ -1.19
SF3B3-209ENST00000567635 DPP7Q9UHL4 492 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 MUTYHQ9UIF7 546 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 NR2E1Q9Y466 385 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 CLIC4Q9Y696 253 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 ZNF318Q5VUA4 2279 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 TRIOO75962 3097 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 MUC6Q6W4X9 2439 aa7.59□□□□□ -1.19
SF3B3-209ENST00000567635 SMIM28A0A1B0GU29 152 aa7.58□□□□□ -1.2
SF3B3-209ENST00000567635 CASTOR2A6NHX0 329 aa7.58□□□□□ -1.2
SF3B3-209ENST00000567635 PRR33A8MZF0 331 aa7.58□□□□□ -1.2
SF3B3-209ENST00000567635 H0YCG3 227 aa7.58□□□□□ -1.2
SF3B3-209ENST00000567635 TEX28O15482 410 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms