RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 ALDH2P05091 517 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 SLFN14P0C7P3 912 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 LIG4P49917 911 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 MCL1Q07820 350 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 DSC1Q08554 894 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 TMEM173Q86WV6 379 aaPredicted RBP23.69■■□□□ 1.38
NME3-210ENST00000567271 COLGALT2Q8IYK4 626 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 RPS6KC1Q96S38 1066 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 CCDC94Q9BW85 323 aaPredicted RBP23.69■■□□□ 1.38
NME3-210ENST00000567271 CXCL16Q9H2A7 254 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 NSUN3Q9H649 340 aaKnown RBP23.69■■□□□ 1.38
NME3-210ENST00000567271 TBC1D7Q9P0N9 293 aa23.69■■□□□ 1.38
NME3-210ENST00000567271 PLXNA4Q9HCM2 1894 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 MYO7AQ13402 2215 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 HNRNPDLO14979 420 aaKnown RBP23.68■■□□□ 1.38
NME3-210ENST00000567271 ACTN4O43707 911 aaKnown RBP23.68■■□□□ 1.38
NME3-210ENST00000567271 PPP1R37O75864 691 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 CSPG5O95196 566 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 IRS1P35568 1242 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 ERVFC1P60507 584 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 GRIK3Q13003 919 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 NOLC1Q14978 699 aaKnown RBP eCLIP23.68■■□□□ 1.38
NME3-210ENST00000567271 CEP57L1Q8IYX8 460 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 HVCN1Q96D96 273 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 IGSF21Q96ID5 467 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 HAPLN2Q9GZV7 340 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 TLR9Q9NR96 1032 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 FAN1Q9Y2M0 1017 aa23.68■■□□□ 1.38
NME3-210ENST00000567271 PTGESO14684 152 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 NRP1O14786 923 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 HARSP12081 509 aaKnown RBP23.67■■□□□ 1.38
NME3-210ENST00000567271 NDUFA8P51970 172 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 OSTNP61366 133 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 ASIC1P78348 528 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 COASYQ13057 564 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 TCEAL5Q5H9L2 206 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 BCL7CQ8WUZ0 217 aaPredicted RBP23.67■■□□□ 1.38
NME3-210ENST00000567271 TMEM169Q96HH4 297 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 PRDM6Q9NQX0 595 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 USP25Q9UHP3 1055 aa23.67■■□□□ 1.38
NME3-210ENST00000567271 FSCN2O14926 492 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 MATR3P43243 847 aaKnown RBP eCLIP23.66■■□□□ 1.38
NME3-210ENST00000567271 SYKP43405 635 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 AFMP43652 599 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 OR1G1P47890 313 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 YARSP54577 528 aaKnown RBP23.66■■□□□ 1.38
NME3-210ENST00000567271 SKIV2LQ15477 1246 aaKnown RBP23.66■■□□□ 1.38
NME3-210ENST00000567271 TPRNQ4KMQ1 711 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 SLC39A4Q6P5W5 647 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 ALKAL1Q6UXT8 129 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 FSIP1Q8NA03 581 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 ACAP3Q96P50 834 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 BLZF1Q9H2G9 400 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 TOPORSQ9NS56 1045 aaPredicted RBP23.66■■□□□ 1.38
NME3-210ENST00000567271 PCDHB13Q9Y5F0 798 aa23.66■■□□□ 1.38
NME3-210ENST00000567271 GCNT3O95395 438 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 THP07101 528 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 MYBP10242 640 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 CASP1P29466 404 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 CASP5P51878 434 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 ALCAMQ13740 583 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 NAB2Q15742 525 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 XKR4Q5GH76 650 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 L1TD1Q5T7N2 865 aaKnown RBP23.65■■□□□ 1.38
NME3-210ENST00000567271 PDE12Q6L8Q7 609 aaKnown RBP23.65■■□□□ 1.38
NME3-210ENST00000567271 DDX53Q86TM3 631 aaKnown RBP23.65■■□□□ 1.38
NME3-210ENST00000567271 GRAMD1CQ8IYS0 662 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 MICAL1Q8TDZ2 1067 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 PAGE5Q96GU1 130 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 FGFBP2Q9BYJ0 223 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 GOLPH3LQ9H4A5 285 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 PCDHGC5Q9Y5F6 944 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 ATG2AQ2TAZ0 1938 aa23.65■■□□□ 1.38
NME3-210ENST00000567271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.64■■□□□ 1.37
NME3-210ENST00000567271 ANKRD63C9JTQ0 380 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 NR1I2O75469 434 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 KCNA1Q09470 495 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 TUSC3Q13454 348 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 CUL4BQ13620 913 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 SEZ6Q53EL9 994 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 UNC13DQ70J99 1090 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 HPS3Q969F9 1004 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 ACCSQ96QU6 501 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 TCF25Q9BQ70 676 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 MARCH5Q9NX47 278 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 EXOC7Q9UPT5 735 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 PRG3Q9Y2Y8 225 aaPredicted RBP23.64■■□□□ 1.37
NME3-210ENST00000567271 STYXL1Q9Y6J8 313 aa23.64■■□□□ 1.37
NME3-210ENST00000567271 TDRD15B5MCY1 1934 aaKnown RBP23.64■■□□□ 1.37
NME3-210ENST00000567271 A0A0B4J269 797 aa23.63■■□□□ 1.37
NME3-210ENST00000567271 SMIM28A0A1B0GU29 152 aa23.63■■□□□ 1.37
NME3-210ENST00000567271 MEFVO15553 781 aaPredicted RBP23.63■■□□□ 1.37
NME3-210ENST00000567271 SNX27Q96L92 541 aa23.63■■□□□ 1.37
NME3-210ENST00000567271 PPP1R10Q96QC0 940 aaKnown RBP23.63■■□□□ 1.37
NME3-210ENST00000567271 COLEC11Q9BWP8 271 aa23.63■■□□□ 1.37
NME3-210ENST00000567271 VN1R3Q9BXE9 311 aa23.63■■□□□ 1.37
NME3-210ENST00000567271 IKZF4Q9H2S9 585 aa23.63■■□□□ 1.37
NME3-210ENST00000567271 NGRNQ9NPE2 291 aaKnown RBP23.63■■□□□ 1.37
NME3-210ENST00000567271 CHMP5Q9NZZ3 219 aa23.63■■□□□ 1.37
NME3-210ENST00000567271 PVALEFA0A1B0GWK0 134 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms