RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 RFC5P40937 340 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 QARSP47897 775 aaKnown RBP12.53□□□□□ -0.4
SPG7-216ENST00000567138 STARD6P59095 220 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
SPG7-216ENST00000567138 UBXN2BQ14CS0 331 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 EMC2Q15006 297 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 ME3Q16798 604 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 LILRA6Q6PI73 481 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 PRSS55Q6UWB4 352 aaPredicted RBP12.53□□□□□ -0.4
SPG7-216ENST00000567138 GRASPQ7Z6J2 395 aaPredicted RBP12.53□□□□□ -0.4
SPG7-216ENST00000567138 MBOAT7Q96N66 472 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 COLEC11Q9BWP8 271 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
SPG7-216ENST00000567138 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.53□□□□□ -0.4
SPG7-216ENST00000567138 DDX25Q9UHL0 483 aaKnown RBP12.53□□□□□ -0.4
SPG7-216ENST00000567138 VAV3Q9UKW4 847 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 PCDHA4Q9UN74 947 aa12.53□□□□□ -0.4
SPG7-216ENST00000567138 MTF2Q9Y483 593 aaPredicted RBP12.53□□□□□ -0.4
SPG7-216ENST00000567138 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.4
SPG7-216ENST00000567138 PDCD11Q14690 1871 aaKnown RBP12.52□□□□□ -0.4
SPG7-216ENST00000567138 LAMTOR5O43504 91 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 PFKFB2O60825 505 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 NR1I2O75469 434 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
SPG7-216ENST00000567138 MLF2Q15773 248 aaPredicted RBP12.52□□□□□ -0.41
SPG7-216ENST00000567138 INF2Q27J81 1249 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 USP41Q3LFD5 358 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.41
SPG7-216ENST00000567138 NOTUMQ6P988 496 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 FERMT3Q86UX7 667 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 TRIM22Q8IYM9 498 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 BLIDQ8IZY5 108 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 NECAB1Q8N987 351 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 HASPINQ8TF76 798 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 TCP11Q8WWU5 503 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 SHDQ96IW2 340 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 CSRNP2Q9H175 543 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 FNIP2Q9P278 1114 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 ADAM28Q9UKQ2 775 aa12.52□□□□□ -0.41
SPG7-216ENST00000567138 KANSL1LA0AUZ9 987 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 INO80B-WBP1J3KQ70 363 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 M0R2N6 131 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 CCL16O15467 120 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 P4HBP07237 508 aaKnown RBP12.51□□□□□ -0.41
SPG7-216ENST00000567138 AKAP5P24588 427 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 AXLP30530 894 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 CSTF1Q05048 431 aaKnown RBP12.51□□□□□ -0.41
SPG7-216ENST00000567138 SCRN1Q12765 414 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 PPP2R5CQ13362 524 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 NPY5RQ15761 445 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 MOXD1Q6UVY6 613 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 CDR2LQ86X02 465 aaPredicted RBP12.51□□□□□ -0.41
SPG7-216ENST00000567138 CCDC51Q96ER9 411 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 ZSCAN31Q96LW9 406 aaPredicted RBP12.51□□□□□ -0.41
SPG7-216ENST00000567138 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 MTRQ99707 1265 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 KXD1Q9BQD3 176 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 LXNQ9BS40 222 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 BCO2Q9BYV7 579 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 TRIM6Q9C030 488 aaPredicted RBP12.51□□□□□ -0.41
SPG7-216ENST00000567138 KLK14Q9P0G3 267 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 FBXW11Q9UKB1 542 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 CDH7Q9ULB5 785 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 COL4A2P08572 1712 aa12.51□□□□□ -0.41
SPG7-216ENST00000567138 CPLX1O14810 134 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 ZBTB39O15060 712 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 SPTLC1O15269 473 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 B4GALT5O43286 388 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 DKC1O60832 514 aaKnown RBP eCLIP12.5□□□□□ -0.41
SPG7-216ENST00000567138 DEXIO95424 95 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 NPTXRO95502 500 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 CD72P21854 359 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 YWHABP31946 246 aaKnown RBP12.5□□□□□ -0.41
SPG7-216ENST00000567138 MCM2P49736 904 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 PTENP60484 403 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 ZNF528Q3MIS6 628 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 XKR9Q5GH70 373 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 PPM1LQ5SGD2 360 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 NCAPH2Q6IBW4 605 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 EXOC8Q8IYI6 725 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 GSTCDQ8NEC7 633 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 ITFG1Q8TB96 612 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 ASAP3Q8TDY4 903 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 DYDC2Q96IM9 177 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 PAAF1Q9BRP4 392 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 DDX23Q9BUQ8 820 aaKnown RBP12.5□□□□□ -0.41
SPG7-216ENST00000567138 LTB4R2Q9NPC1 389 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 XPNPEP1Q9NQW7 623 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 RGL1Q9NZL6 768 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 FBXO4Q9UKT5 387 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 SMG5Q9UPR3 1016 aaKnown RBP12.5□□□□□ -0.41
SPG7-216ENST00000567138 GIT1Q9Y2X7 761 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 PPME1Q9Y570 386 aa12.5□□□□□ -0.41
SPG7-216ENST00000567138 ZFP37Q9Y6Q3 630 aaPredicted RBP12.5□□□□□ -0.41
SPG7-216ENST00000567138 SF3B1O75533 1304 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPG7-216ENST00000567138 FAM170BA6NMN3 283 aa12.49□□□□□ -0.41
SPG7-216ENST00000567138 ASAP2O43150 1006 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms