RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 LINC00301Q8NCQ3 95 aa21.2■□□□□ 0.98
CCDC113-204ENST00000566498 RABGGTAQ92696 567 aa21.2■□□□□ 0.98
CCDC113-204ENST00000566498 ZBP1Q9H171 429 aa21.2■□□□□ 0.98
CCDC113-204ENST00000566498 PARVGQ9HBI0 331 aa21.2■□□□□ 0.98
CCDC113-204ENST00000566498 CLEC1BQ9P126 229 aa21.2■□□□□ 0.98
CCDC113-204ENST00000566498 BARX2Q9UMQ3 279 aaPredicted RBP21.2■□□□□ 0.98
CCDC113-204ENST00000566498 SPTBN5Q9NRC6 3674 aaKnown RBP21.2■□□□□ 0.98
CCDC113-204ENST00000566498 TBCAO75347 108 aaKnown RBP21.19■□□□□ 0.98
CCDC113-204ENST00000566498 GLP2RO95838 553 aa21.19■□□□□ 0.98
CCDC113-204ENST00000566498 F13A1P00488 732 aa21.19■□□□□ 0.98
CCDC113-204ENST00000566498 MAPTP10636 758 aaKnown RBP21.19■□□□□ 0.98
CCDC113-204ENST00000566498 MATR3P43243 847 aaKnown RBP eCLIP21.19■□□□□ 0.98
CCDC113-204ENST00000566498 CCDC73Q6ZRK6 1079 aa21.19■□□□□ 0.98
CCDC113-204ENST00000566498 SV2BQ7L1I2 683 aa21.19■□□□□ 0.98
CCDC113-204ENST00000566498 HAUS6Q7Z4H7 955 aa21.19■□□□□ 0.98
CCDC113-204ENST00000566498 BICD1Q96G01 975 aa21.19■□□□□ 0.98
CCDC113-204ENST00000566498 CCDC94Q9BW85 323 aaPredicted RBP21.19■□□□□ 0.98
CCDC113-204ENST00000566498 STK17AQ9UEE5 414 aa21.19■□□□□ 0.98
CCDC113-204ENST00000566498 MORC2Q9Y6X9 1032 aaPredicted RBP21.19■□□□□ 0.98
CCDC113-204ENST00000566498 TADA2AO75478 443 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 HARSP12081 509 aaKnown RBP21.18■□□□□ 0.98
CCDC113-204ENST00000566498 YARSP54577 528 aaKnown RBP21.18■□□□□ 0.98
CCDC113-204ENST00000566498 MPZL3Q6UWV2 235 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 DYMQ7RTS9 669 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 VN1R2Q8NFZ6 395 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 ZBTB45Q96K62 511 aaPredicted RBP21.18■□□□□ 0.98
CCDC113-204ENST00000566498 MSLNLQ96KJ4 702 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 VN1R3Q9BXE9 311 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 CDT1Q9H211 546 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 PTPRHQ9HD43 1115 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 MRPL17Q9NRX2 175 aaKnown RBP21.18■□□□□ 0.98
CCDC113-204ENST00000566498 ZMYM2Q9UBW7 1377 aa21.18■□□□□ 0.98
CCDC113-204ENST00000566498 C2CD2LO14523 706 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 MBTPS2O43462 519 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 TRAK2O60296 914 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 CLASP2O75122 1294 aaKnown RBP21.17■□□□□ 0.98
CCDC113-204ENST00000566498 PPP6R2O75170 966 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 MCF2P10911 925 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 STAT6P42226 847 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 TUSC3Q13454 348 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 SMAD4Q13485 552 aaKnown RBP21.17■□□□□ 0.98
CCDC113-204ENST00000566498 PKP1Q13835 747 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 KIAA1841Q6NSI8 718 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 TAS1R1Q7RTX1 841 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 FAM178BQ8IXR5 827 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 PDILTQ8N807 584 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 ACAP3Q96P50 834 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 CXCL16Q9H2A7 254 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 MARCH5Q9NX47 278 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 ANKFY1Q9P2R3 1169 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 CACNG4Q9UBN1 327 aa21.17■□□□□ 0.98
CCDC113-204ENST00000566498 CASTOR2A6NHX0 329 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 F8W810 466 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 PTGESO14684 152 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 CLDN3O15551 220 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 TOM1L1O75674 476 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 YEATS4O95619 227 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 SOD2P04179 222 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 SSTR3P32745 418 aaPredicted RBP21.16■□□□□ 0.98
CCDC113-204ENST00000566498 GRM5P41594 1212 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 ZNF131P52739 623 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 NCKAP1LP55160 1127 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 COASYQ13057 564 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 ZPBP2Q6X784 338 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 TMEM184AQ6ZMB5 413 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 CEP120Q8N960 986 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 APOL5Q9BWW9 433 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 EMILIN2Q9BXX0 1053 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 TOPORSQ9NS56 1045 aaPredicted RBP21.16■□□□□ 0.98
CCDC113-204ENST00000566498 SSX2IPQ9Y2D8 614 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 IRAK3Q9Y616 596 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 CUL9Q8IWT3 2517 aa21.16■□□□□ 0.98
CCDC113-204ENST00000566498 K7ENM7 598 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 URODP06132 367 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 SCP2P22307 547 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 PROZP22891 400 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 KLRC2P26717 231 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 KCNC3Q14003 757 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 HSP90AA2PQ14568 343 aaPredicted RBP21.15■□□□□ 0.98
CCDC113-204ENST00000566498 PTPN14Q15678 1187 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 SMAD2Q15796 467 aaKnown RBP21.15■□□□□ 0.98
CCDC113-204ENST00000566498 GLRA4Q5JXX5 417 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 ANKRD54Q6NXT1 300 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 DDX12PQ92771 950 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 CASP10Q92851 521 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 PAAF1Q9BRP4 392 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 ADAM28Q9UKQ2 775 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 CFAP45Q9UL16 551 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 TBX20Q9UMR3 447 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 HCFC2Q9Y5Z7 792 aa21.15■□□□□ 0.98
CCDC113-204ENST00000566498 MYMKA6NI61 221 aa21.14■□□□□ 0.97
CCDC113-204ENST00000566498 CUTAO60888 179 aa21.14■□□□□ 0.97
CCDC113-204ENST00000566498 LIG4P49917 911 aa21.14■□□□□ 0.97
CCDC113-204ENST00000566498 ATL3Q6DD88 541 aa21.14■□□□□ 0.97
CCDC113-204ENST00000566498 SMRP1Q8NCR6 262 aa21.14■□□□□ 0.97
CCDC113-204ENST00000566498 GPR62Q9BZJ7 368 aa21.14■□□□□ 0.97
CCDC113-204ENST00000566498 MYH15Q9Y2K3 1946 aa21.14■□□□□ 0.97
CCDC113-204ENST00000566498 SMIM28A0A1B0GU29 152 aa21.13■□□□□ 0.97
CCDC113-204ENST00000566498 CNPP09543 421 aaKnown RBP21.13■□□□□ 0.97
CCDC113-204ENST00000566498 HOXB8P17481 243 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms