RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 GCNT1Q02742 428 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 KIF5AQ12840 1032 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 DRP2Q13474 957 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 BMS1Q14692 1282 aaKnown RBP9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 KIF22Q14807 665 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 ZACNQ401N2 412 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 MTHFD1LQ6UB35 978 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 CRELD2Q6UXH1 353 aaPredicted RBP9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 SRGAP1Q7Z6B7 1085 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 RNF149Q8NC42 400 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 FBXL13Q8NEE6 735 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 UBE2Q2Q8WVN8 375 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 SAAL1Q96ER3 474 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 FAXDC2Q96IV6 333 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 TARS2Q9BW92 718 aaKnown RBP9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 IFIH1Q9BYX4 1025 aaKnown RBP9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 DEF6Q9H4E7 631 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 FLRT1Q9NZU1 646 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 DNAI1Q9UI46 699 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 PCDHA13Q9Y5I0 950 aa9.6□□□□□ -0.87
LSM3P5-201ENST00000566307 SMIM35A0A1B0GVV1 85 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 GOLGA8IPA6NC78 632 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 GOLGA8JA6NMD2 632 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 TRIM66O15016 1216 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 CLDN3O15551 220 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 ZEB2O60315 1214 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 PLEKP08567 350 aaPredicted RBP9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 AKR1A1P14550 325 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 CASQ1P31415 396 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 GCLMP48507 274 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 TUBB4BP68371 445 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 ADAM17P78536 824 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 MBTD1Q05BQ5 628 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 PPFIA1Q13136 1202 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 DRAP1Q14919 205 aaPredicted RBP9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 GRIK4Q16099 956 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 TDRD12Q587J7 1177 aaKnown RBP9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 MARCH8Q5T0T0 291 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 CCDC122Q5T0U0 273 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 GJC2Q5T442 439 aaPredicted RBP9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 PHLDB3Q6NSJ2 640 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 MPZL3Q6UWV2 235 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 SV2AQ7L0J3 742 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 KIAA1328Q86T90 577 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 TLK2Q86UE8 772 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 LRRC71Q8N4P6 559 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 RDH13Q8NBN7 331 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 ZSWIM2Q8NEG5 633 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 SHC3Q92529 594 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 CALR3Q96L12 384 aaKnown RBP9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 NT5C1BQ96P26 610 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 MAP7D2Q96T17 732 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 CGRRF1Q99675 332 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 FAM213AQ9BRX8 229 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 MSTO1Q9BUK6 570 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 KATNAL1Q9BW62 490 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 GPR88Q9GZN0 384 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 HAPLN2Q9GZV7 340 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 UPF3AQ9H1J1 476 aaKnown RBP9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 KDM4CQ9H3R0 1056 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 OCEL1Q9H607 264 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 SUGCTQ9HAC7 445 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 IFT122Q9HBG6 1241 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 LZTFL1Q9NQ48 299 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 RAB20Q9NX57 234 aa9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 CPSF3Q9UKF6 684 aaKnown RBP9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 ABT1Q9ULW3 272 aaKnown RBP9.59□□□□□ -0.87
LSM3P5-201ENST00000566307 CNTNAP2Q9UHC6 1331 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 KAT6AQ92794 2004 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 A0A0A6YYK5 440 aaPredicted RBP9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 DYNC1I1O14576 645 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 FANCGO15287 622 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 ADCY6O43306 1168 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 EVI5O60447 810 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 DUSP11O75319 330 aaKnown RBP9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 C4BPAP04003 597 aaKnown RBP9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 EDN1P05305 212 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 RPLP2P05387 115 aaKnown RBP9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 ZNF286BP0CG31 522 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 MCF2P10911 925 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 CYBAP13498 195 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 MAGEA1P43355 309 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 MFAP3P55082 362 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 NLRP11P59045 1033 aaKnown RBP9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 LACTBP83111 547 aaPredicted RBP9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 APBA1Q02410 837 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 PTK2Q05397 1052 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 PRPF4BQ13523 1007 aaKnown RBP9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 DSG2Q14126 1118 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 NAB2Q15742 525 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 AMHR2Q16671 573 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 MFSD14CQ5VZR4 134 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 ZNF571Q7Z3V5 609 aaPredicted RBP9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 RHPN2Q8IUC4 686 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 WDR49Q8IV35 697 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 TRIM58Q8NG06 486 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 SLC30A5Q8TAD4 765 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 HELQQ8TDG4 1101 aa9.58□□□□□ -0.88
LSM3P5-201ENST00000566307 TRAPPC12Q8WVT3 735 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms