RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MBTD1Q05BQ5 628 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 SPIRE1Q08AE8 756 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 GRIK3Q13003 919 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 INF2Q27J81 1249 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 PARM1Q6UWI2 310 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 MTSS1LQ765P7 747 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 KRT25Q7Z3Z0 450 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 SKAP1Q86WV1 359 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 ZBTB44Q8NCP5 570 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 B3GALT6Q96L58 329 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 MTRQ99707 1265 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 CLSTN3Q9BQT9 956 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 LXNQ9BS40 222 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 ZSWIM4Q9H7M6 989 aa14.2□□□□□ -0.14
RNF40-208ENST00000565995 SPAG17Q6Q759 2223 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 ZBTB39O15060 712 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 LILRB5O75023 590 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 SLITRK3O94933 977 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 MYBP10242 640 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 PSMA5P28066 241 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 ARL2P36404 184 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 TOB2Q14106 344 aaPredicted RBP14.19□□□□□ -0.14
RNF40-208ENST00000565995 TFDP1Q14186 410 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 RSPO4Q2I0M5 234 aaPredicted RBP14.19□□□□□ -0.14
RNF40-208ENST00000565995 UVSSAQ2YD98 709 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 SLC44A4Q53GD3 710 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 VARS2Q5ST30 1063 aaKnown RBP14.19□□□□□ -0.14
RNF40-208ENST00000565995 RTL10Q7L3V2 364 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 HACE1Q8IYU2 909 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 PIK3R5Q8WYR1 880 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 CLDN23Q96B33 292 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 ZNF274Q96GC6 653 aaPredicted RBP14.19□□□□□ -0.14
RNF40-208ENST00000565995 CPB2Q96IY4 423 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 PCDHGA2Q9Y5H1 932 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 MAP1BP46821 2468 aaKnown RBP14.19□□□□□ -0.14
RNF40-208ENST00000565995 GREB1Q4ZG55 1949 aa14.19□□□□□ -0.14
RNF40-208ENST00000565995 LRRN2O75325 713 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 LYPLA2O95372 231 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 RPL17P18621 184 aaKnown RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 SNW1Q13573 536 aaKnown RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 HSP90AA2PQ14568 343 aaPredicted RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 MLF2Q15773 248 aaPredicted RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 XKR9Q5GH70 373 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 RTP2Q5QGT7 225 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 SLC27A1Q6PCB7 646 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 GRASPQ7Z6J2 395 aaPredicted RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 LNX1Q8TBB1 728 aaPredicted RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 FGF13Q92913 245 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 NELL2Q99435 816 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 NAP1L4Q99733 375 aaKnown RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 PHF20Q9BVI0 1012 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 BCO2Q9BYV7 579 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 SLKQ9H2G2 1235 aaPredicted RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 NXF3Q9H4D5 531 aaKnown RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 RGL1Q9NZL6 768 aa14.18□□□□□ -0.14
RNF40-208ENST00000565995 DAXXQ9UER7 740 aaPredicted RBP14.18□□□□□ -0.14
RNF40-208ENST00000565995 SF3B1O75533 1304 aaKnown RBP eCLIP14.17□□□□□ -0.141e-8■■■■■ 103.4
RNF40-208ENST00000565995 KIF26AQ9ULI4 1882 aaPredicted RBP14.17□□□□□ -0.14
RNF40-208ENST00000565995 MYH11P35749 1972 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 INO80B-WBP1J3KQ70 363 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 TADA2AO75478 443 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 AKAP5P24588 427 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 RPS9P46781 194 aaKnown RBP14.17□□□□□ -0.14
RNF40-208ENST00000565995 PFKPQ01813 784 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 TUSC3Q13454 348 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 CAPSQ13938 189 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 NAB2Q15742 525 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 PDXDC1Q6P996 788 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 PRSS55Q6UWB4 352 aaPredicted RBP14.17□□□□□ -0.14
RNF40-208ENST00000565995 MAMSTRQ6ZN01 415 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 RUFY3Q7L099 469 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 NEK8Q86SG6 692 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 GLYCTKQ8IVS8 523 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 DYDC2Q96IM9 177 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 HSD17B14Q9BPX1 270 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 HINFPQ9BQA5 517 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 TTPALQ9BTX7 342 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 TRIM6Q9C030 488 aaPredicted RBP14.17□□□□□ -0.14
RNF40-208ENST00000565995 EPC1Q9H2F5 836 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 ZSWIM6Q9HCJ5 1215 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 ANKEF1Q9NU02 776 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
RNF40-208ENST00000565995 MTF2Q9Y483 593 aaPredicted RBP14.17□□□□□ -0.14
RNF40-208ENST00000565995 CHD8Q9HCK8 2581 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 DENND4CQ5VZ89 1909 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 FAM170BA6NMN3 283 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 LAMTOR5O43504 91 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 DGAT1O75907 488 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 TGM1P22735 817 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 FZD5Q13467 585 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 RAB33AQ14088 237 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 PPM1LQ5SGD2 360 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 SLFN12Q8IYM2 578 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 ASAP3Q8TDY4 903 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 PRIMPOLQ96LW4 560 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 AIFM3Q96NN9 605 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 PAAF1Q9BRP4 392 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 LTB4R2Q9NPC1 389 aa14.16□□□□□ -0.14
RNF40-208ENST00000565995 AVENQ9NQS1 362 aaPredicted RBP14.16□□□□□ -0.14
RNF40-208ENST00000565995 SPATA6Q9NWH7 488 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms