RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 COLEC11Q9BWP8 271 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 C2orf40Q9H1Z8 148 aa26.22■■□□□ 1.79
RAB40C-209ENST00000565511 CACNA1HO95180 2353 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 CASTOR2A6NHX0 329 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 E9PMD0 336 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 ACKR2O00590 384 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 N4BP3O15049 544 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 RFPL2O75678 378 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 MUTP22033 750 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 MAPK6Q16659 721 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 ALYREFQ86V81 257 aaKnown RBP26.21■■□□□ 1.79
RAB40C-209ENST00000565511 GLYCTKQ8IVS8 523 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 DAW1Q8N136 415 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 PHOX2BQ99453 314 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 MMTAG2Q9BU76 263 aaKnown RBP26.21■■□□□ 1.79
RAB40C-209ENST00000565511 KCNH6Q9H252 994 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 ADAM28Q9UKQ2 775 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 SORCS3Q9UPU3 1222 aa26.21■■□□□ 1.79
RAB40C-209ENST00000565511 SPDYE4A6NLX3 237 aa26.2■■□□□ 1.78
RAB40C-209ENST00000565511 N4BP1O75113 896 aaKnown RBP26.2■■□□□ 1.78
RAB40C-209ENST00000565511 KIF4AO95239 1232 aa26.2■■□□□ 1.78
RAB40C-209ENST00000565511 CENPBP07199 599 aaPredicted RBP26.2■■□□□ 1.78
RAB40C-209ENST00000565511 ADH1AP07327 375 aa26.2■■□□□ 1.78
RAB40C-209ENST00000565511 RTP2Q5QGT7 225 aa26.2■■□□□ 1.78
RAB40C-209ENST00000565511 PRSS55Q6UWB4 352 aaPredicted RBP26.2■■□□□ 1.78
RAB40C-209ENST00000565511 RUSC1Q9BVN2 902 aa26.2■■□□□ 1.78
RAB40C-209ENST00000565511 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.2■■□□□ 1.78
RAB40C-209ENST00000565511 USTQ9Y2C2 406 aa26.2■■□□□ 1.78
RAB40C-209ENST00000565511 GLUD1P00367 558 aa26.19■■□□□ 1.78
RAB40C-209ENST00000565511 TUSC3Q13454 348 aa26.19■■□□□ 1.78
RAB40C-209ENST00000565511 MTMR3Q13615 1198 aa26.19■■□□□ 1.78
RAB40C-209ENST00000565511 HSP90AA2PQ14568 343 aaPredicted RBP26.19■■□□□ 1.78
RAB40C-209ENST00000565511 TMEM132AQ24JP5 1023 aa26.19■■□□□ 1.78
RAB40C-209ENST00000565511 PALB2Q86YC2 1186 aa26.19■■□□□ 1.78
RAB40C-209ENST00000565511 SUGP1Q8IWZ8 645 aaKnown RBP26.19■■□□□ 1.78
RAB40C-209ENST00000565511 CMASQ8NFW8 434 aaPredicted RBP26.19■■□□□ 1.78
RAB40C-209ENST00000565511 RIN2Q8WYP3 895 aaPredicted RBP26.19■■□□□ 1.78
RAB40C-209ENST00000565511 ZNF707Q96C28 371 aaPredicted RBP26.19■■□□□ 1.78
RAB40C-209ENST00000565511 GDAQ9Y2T3 454 aa26.19■■□□□ 1.78
RAB40C-209ENST00000565511 TCF15Q12870 199 aa26.18■■□□□ 1.78
RAB40C-209ENST00000565511 MAPK7Q13164 816 aa26.18■■□□□ 1.78
RAB40C-209ENST00000565511 PDIA5Q14554 519 aa26.18■■□□□ 1.78
RAB40C-209ENST00000565511 RABEP1Q15276 862 aa26.18■■□□□ 1.78
RAB40C-209ENST00000565511 CCDC149Q6ZUS6 474 aa26.18■■□□□ 1.78
RAB40C-209ENST00000565511 TAS1R3Q7RTX0 852 aa26.18■■□□□ 1.78
RAB40C-209ENST00000565511 CCDC195A0A1B0GUA6 201 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 TGM5O43548 720 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 NR1I2O75469 434 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 PPP2R5AQ15172 486 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 USP41Q3LFD5 358 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 C15orf39Q6ZRI6 1047 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 CEP120Q8N960 986 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 TMX3Q96JJ7 454 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 SSX2IPQ9Y2D8 614 aa26.17■■□□□ 1.78
RAB40C-209ENST00000565511 GLRA4Q5JXX5 417 aa26.16■■□□□ 1.78
RAB40C-209ENST00000565511 LILRA6Q6PI73 481 aa26.16■■□□□ 1.78
RAB40C-209ENST00000565511 KIFAP3Q92845 792 aa26.16■■□□□ 1.78
RAB40C-209ENST00000565511 IFT74Q96LB3 600 aa26.16■■□□□ 1.78
RAB40C-209ENST00000565511 MYH11P35749 1972 aa26.16■■□□□ 1.78
RAB40C-209ENST00000565511 HIP1RO75146 1068 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 TADA2AO75478 443 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 AVPR2P30518 371 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 NPTX2P47972 431 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 MRE11P49959 708 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 ATF7IP2Q5U623 682 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 UBALD2Q8IYN6 164 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 PNMA5Q96PV4 448 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 FNIP2Q9P278 1114 aa26.15■■□□□ 1.78
RAB40C-209ENST00000565511 SF3B1O75533 1304 aaKnown RBP eCLIP26.14■■□□□ 1.781e-6■■■■■ 94.1
RAB40C-209ENST00000565511 ADAM12O43184 909 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 PAPLNO95428 1278 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 THP07101 528 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 PRPHP41219 470 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 PEX3P56589 373 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 DCAF4L1Q3SXM0 396 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 MCTP1Q6DN14 999 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 CD300LGQ6UXG3 332 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 ADPGKQ9BRR6 497 aa26.14■■□□□ 1.78
RAB40C-209ENST00000565511 CLUHO75153 1309 aa26.14■■□□□ 1.77
RAB40C-209ENST00000565511 GJB2P29033 226 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 EFNA5P52803 228 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 ATP2C1P98194 919 aaPredicted RBP26.13■■□□□ 1.77
RAB40C-209ENST00000565511 RINT1Q6NUQ1 792 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 C1orf186Q6ZWK4 172 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 OTOP3Q7RTS5 596 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 PLCD3Q8N3E9 789 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 SMG7Q92540 1137 aaKnown RBP26.13■■□□□ 1.77
RAB40C-209ENST00000565511 PPP1R10Q96QC0 940 aaKnown RBP26.13■■□□□ 1.77
RAB40C-209ENST00000565511 MYADMQ96S97 322 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 CLSTN3Q9BQT9 956 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 CDT1Q9H211 546 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 GOLGA2P5Q9HBQ8 144 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 WDR6Q9NNW5 1121 aaKnown RBP26.13■■□□□ 1.77
RAB40C-209ENST00000565511 ARHGAP28Q9P2N2 729 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 CITO14578 2027 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 PHLPP2Q6ZVD8 1323 aa26.13■■□□□ 1.77
RAB40C-209ENST00000565511 CCDC169A6NNP5 214 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 ABLIM1O14639 778 aa26.12■■□□□ 1.77
RAB40C-209ENST00000565511 MEFVO15553 781 aaPredicted RBP26.12■■□□□ 1.77
RAB40C-209ENST00000565511 FAM171A1Q5VUB5 890 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms