RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 SLCO1A2P46721 670 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 QARSP47897 775 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 PDE6CP51160 858 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 HSD17B4P51659 736 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 CDR2Q01850 454 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 CALCOCO2Q13137 446 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 XRCC4Q13426 336 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 AUHQ13825 339 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 PPP1R7Q15435 360 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 SNCBQ16143 134 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 TNFAIP8L3Q5GJ75 292 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 MFSD5Q6N075 450 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 RNF207Q6ZRF8 634 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 TRMT10CQ7L0Y3 403 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 TAOK1Q7L7X3 1001 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 NIPA1Q7RTP0 329 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 PIGWQ7Z7B1 504 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 CPNE8Q86YQ8 564 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 LRRC34Q8IZ02 419 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 SLCO2A1Q92959 643 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 ZKSCAN4Q969J2 545 aaPredicted RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 BTBD6Q96KE9 485 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 TIPINQ9BVW5 301 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 ROPN1BQ9BZX4 212 aaPredicted RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 NSRP1Q9H0G5 558 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 LRRC19Q9H756 370 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 ROPN1Q9HAT0 212 aaPredicted RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.78□□□□□ -1.16
SMG1-210ENST00000565224 FEM1BQ9UK73 627 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 SLX4Q8IY92 1834 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 SCN9AQ15858 1988 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 GOLGA8IPA6NC78 632 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 GOLGA8JA6NMD2 632 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 DHX15O43143 795 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 GSTA1P08263 222 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 KCNJ1P48048 391 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 NCKAP1LP55160 1127 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 GSCP56915 257 aaPredicted RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 MCCD1P59942 119 aaPredicted RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 MAP2K1Q02750 393 aaPredicted RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 ZYXQ15942 572 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 SNRNP35Q16560 246 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 AOC3Q16853 763 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 KRT39Q6A163 491 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 MIGA2Q7L4E1 593 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 CCDC25Q86WR0 208 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 CBWD2Q8IUF1 395 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 SLC17A8Q8NDX2 589 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 SEMA4DQ92854 862 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 PRMT1Q99873 361 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 JPH2Q9BR39 696 aaPredicted RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 PLVAPQ9BX97 442 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 AGO4Q9HCK5 861 aaKnown RBP7.78□□□□□ -1.16
SMG1-210ENST00000565224 ACP6Q9NPH0 428 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 WHRNQ9P202 907 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 EXOC7Q9UPT5 735 aa7.78□□□□□ -1.16
SMG1-210ENST00000565224 SMCHD1A6NHR9 2005 aa7.77□□□□□ -1.16
SMG1-210ENST00000565224 FSCN2O14926 492 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 SLC16A4O15374 487 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 CLDN3O15551 220 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 PPIP5K2O43314 1243 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 VIMP08670 466 aaKnown RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 DLATP10515 647 aaKnown RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 YWHABP31946 246 aaKnown RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 IRX3P78415 501 aaPredicted RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 CNGA2Q16280 664 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 ZNF568Q3ZCX4 644 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 SGO2Q562F6 1265 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 MSL1Q68DK7 614 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 STYK1Q6J9G0 422 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 NSMFQ6X4W1 530 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 IL31RAQ8NI17 732 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 HELQQ8TDG4 1101 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 PSPC1Q8WXF1 523 aaKnown RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 CNKSR2Q8WXI2 1034 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 KIFAP3Q92845 792 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 MYCBPQ99417 103 aaPredicted RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 CCDC113Q9H0I3 377 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 TMEM8AQ9HCN3 771 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 FBXO28Q9NVF7 368 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 GEMIN8Q9NWZ8 242 aaKnown RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 COL20A1Q9P218 1284 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 ZNF219Q9P2Y4 722 aaPredicted RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 CCPG1Q9ULG6 757 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 SLC12A4Q9UP95 1085 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 CLRN2A0PK11 232 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 ICAM1P05362 532 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 ADSSP30520 456 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 MAP2K2P36507 400 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 PTGER2P43116 358 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 GPC3P51654 580 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 PEX3P56589 373 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 KRT17Q04695 432 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 TKFCQ3LXA3 575 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 PREPLQ4J6C6 727 aaPredicted RBP7.77□□□□□ -1.17
SMG1-210ENST00000565224 ACAD10Q6JQN1 1059 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 CHADLQ6NUI6 762 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 MAGEC3Q8TD91 643 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 FAM151AQ8WW52 585 aa7.77□□□□□ -1.17
SMG1-210ENST00000565224 C1orf54Q8WWF1 131 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms