RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 DSC1Q08554 894 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 ZNF568Q3ZCX4 644 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 RARS2Q5T160 578 aaKnown RBP14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 KIAA1841Q6NSI8 718 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 SYCE2Q6PIF2 218 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 GPBP1Q86WP2 473 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 GLYCTKQ8IVS8 523 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 CEP120Q8N960 986 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 GSTCDQ8NEC7 633 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 AK8Q96MA6 479 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 PAAF1Q9BRP4 392 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 TCHPQ9BT92 498 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 ZHX3Q9H4I2 956 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 MYH15Q9Y2K3 1946 aa14.98□□□□□ -0.01
VPS9D1-204ENST00000565023 CITO14578 2027 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 INPPL1O15357 1258 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 TADA2AO75478 443 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 SOD2P04179 222 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 KRT18P05783 430 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 GUCY2CP25092 1073 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 LONP1P36776 959 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 PKP1Q13835 747 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 KCNC3Q14003 757 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 GIT2Q14161 759 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 MCM6Q14566 821 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 DCAF4L1Q3SXM0 396 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 FUT10Q6P4F1 479 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 TAS1R3Q7RTX0 852 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 LRRC15Q8TF66 581 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 KLHL5Q96PQ7 755 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 POP1Q99575 1024 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 HERC2P3Q9BVR0 1158 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 EMILIN2Q9BXX0 1053 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 MRPL4Q9BYD3 311 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 MRPL17Q9NRX2 175 aaKnown RBP14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 TNFSF13BQ9Y275 285 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 WDFY4Q6ZS81 3184 aa14.97□□□□□ -0.01
VPS9D1-204ENST00000565023 PTGESO14684 152 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 THP07101 528 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 CNPP09543 421 aaKnown RBP14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 PLS3P13797 630 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 MATR3P43243 847 aaKnown RBP eCLIP14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 GLUD2P49448 558 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 STRN3Q13033 797 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 TUSC3Q13454 348 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 PTPAQ15257 358 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 TPRNQ4KMQ1 711 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 TMEM184AQ6ZMB5 413 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 USP49Q70CQ1 688 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 APBB1IPQ7Z5R6 666 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 EPSTI1Q96J88 318 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 ZBTB45Q96K62 511 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 CLIC6Q96NY7 704 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 ACO2Q99798 780 aaKnown RBP14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 GPR62Q9BZJ7 368 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 CDT1Q9H211 546 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 S1PR5Q9H228 398 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 TMEM134Q9H6X4 195 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 TSHZ2Q9NRE2 1034 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 ARHGAP28Q9P2N2 729 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 ANKFY1Q9P2R3 1169 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 MUTYHQ9UIF7 546 aa14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 MORC2Q9Y6X9 1032 aaPredicted RBP14.96□□□□□ -0.01
VPS9D1-204ENST00000565023 C19orf67A6NJJ6 358 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 FAM13AO94988 1023 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 F13A1P00488 732 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 SMTNP53814 917 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 HSP90AA2PQ14568 343 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 CBX2Q14781 532 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 FOXD4L6Q3SYB3 417 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 SEZ6Q53EL9 994 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 ARSHQ5FYA8 562 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 CES5AQ6NT32 575 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 TMC5Q6UXY8 1006 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 FOXD4L3Q6VB84 417 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 CEP57Q86XR8 500 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 FEZF2Q8TBJ5 459 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 SLC22A17Q8WUG5 538 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 RAD54LQ92698 747 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 BICD1Q96G01 975 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 USP28Q96RU2 1077 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 REEP2Q9BRK0 252 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 LRFN3Q9BTN0 628 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 TIPINQ9BVW5 301 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 CCDC94Q9BW85 323 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 PHF7Q9BWX1 381 aaPredicted RBP14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 BLOC1S4Q9NUP1 217 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 ADAM28Q9UKQ2 775 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 RBM19Q9Y4C8 960 aaKnown RBP14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 IRAK3Q9Y616 596 aa14.95□□□□□ -0.02
VPS9D1-204ENST00000565023 PI4K2BG5E9Z4 385 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 DCXO43602 365 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 KIF4AO95239 1232 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 BRD1O95696 1058 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 SPATA31D3P0C874 917 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 HOXB8P17481 243 aaPredicted RBP14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 RPL17P18621 184 aaKnown RBP14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 YARSP54577 528 aaKnown RBP14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 TMEM31Q5JXX7 168 aa14.94□□□□□ -0.02
VPS9D1-204ENST00000565023 SPATA31D4Q6ZUB0 917 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms