RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SF3B1O75533 1304 aaKnown RBP eCLIP16.54■□□□□ 0.24
SPG7-210ENST00000564409 C2CD2LO14523 706 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 TEX28O15482 410 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 TADA2AO75478 443 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 THP07101 528 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 MCM2P49736 904 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 NUBP1P53384 320 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 HSP90AA2PQ14568 343 aaPredicted RBP16.54■□□□□ 0.24
SPG7-210ENST00000564409 FUT10Q6P4F1 479 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 DTHD1Q6ZMT9 781 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 CDR2LQ86X02 465 aaPredicted RBP16.54■□□□□ 0.24
SPG7-210ENST00000564409 SNX29Q8TEQ0 813 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 ASIC4Q96FT7 647 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 TIPINQ9BVW5 301 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 C17orf75Q9HAS0 396 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 DDX19AQ9NUU7 478 aaKnown RBP16.54■□□□□ 0.24
SPG7-210ENST00000564409 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 TRIP11Q15643 1979 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 PLXNA3P51805 1871 aa16.54■□□□□ 0.24
SPG7-210ENST00000564409 MYH11P35749 1972 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 K7ERI5 159 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 ELAVL2Q12926 359 aaKnown RBP16.53■□□□□ 0.24
SPG7-210ENST00000564409 PDXDC1Q6P996 788 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 TAS1R1Q7RTX1 841 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 STAMQ92783 540 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 DRC1Q96MC2 740 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 MAN1C1Q9NR34 630 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.53■□□□□ 0.24
SPG7-210ENST00000564409 KLK14Q9P0G3 267 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 CDH22Q9UJ99 828 aa16.53■□□□□ 0.24
SPG7-210ENST00000564409 RBM19Q9Y4C8 960 aaKnown RBP16.53■□□□□ 0.24
SPG7-210ENST00000564409 KMT2EQ8IZD2 1858 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 RECQL4O94761 1208 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 WEE2P0C1S8 567 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 SP100P23497 879 aaPredicted RBP16.52■□□□□ 0.24
SPG7-210ENST00000564409 NBR1Q14596 966 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 ECM1Q16610 540 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 GPR62Q9BZJ7 368 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 IRF2BPLQ9H1B7 796 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 TMEM134Q9H6X4 195 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 ZDHHC7Q9NXF8 308 aa16.52■□□□□ 0.24
SPG7-210ENST00000564409 CCDC195A0A1B0GUA6 201 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 PTGESO14684 152 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 SLC26A4O43511 780 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 PTPN5P54829 565 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 NHLH1Q02575 133 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 DMP1Q13316 513 aaPredicted RBP16.51■□□□□ 0.23
SPG7-210ENST00000564409 ATF7IP2Q5U623 682 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 ARL6IP4Q66PJ3 421 aaKnown RBP16.51■□□□□ 0.23
SPG7-210ENST00000564409 MCTP1Q6DN14 999 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 KANK3Q6NY19 840 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 RIN2Q8WYP3 895 aaPredicted RBP16.51■□□□□ 0.23
SPG7-210ENST00000564409 TMX3Q96JJ7 454 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 NT5C3AQ9H0P0 336 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 WDR6Q9NNW5 1121 aaKnown RBP16.51■□□□□ 0.23
SPG7-210ENST00000564409 SNTG2Q9NY99 539 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 LIMD1Q9UGP4 676 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 TNFSF13BQ9Y275 285 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 CITO14578 2027 aa16.51■□□□□ 0.23
SPG7-210ENST00000564409 TTLL13PA6NNM8 815 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 H3BQV1 296 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 LIG1P18858 919 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 ATP2C1P98194 919 aaPredicted RBP16.5■□□□□ 0.23
SPG7-210ENST00000564409 HYIQ5T013 277 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 LILRA6Q6PI73 481 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 PIK3R5Q8WYR1 880 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 UROC1Q96N76 676 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 TTPALQ9BTX7 342 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 TOPORSQ9NS56 1045 aaPredicted RBP16.5■□□□□ 0.23
SPG7-210ENST00000564409 KCND2Q9NZV8 630 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 IGSF9Q9P2J2 1179 aa16.5■□□□□ 0.23
SPG7-210ENST00000564409 CCDC169A6NNP5 214 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 F8W810 466 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 TMEM189-UBE2V1I3L0A0 370 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 BRD1O95696 1058 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 GUCY2CP25092 1073 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 AVPR2P30518 371 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 NPTX2P47972 431 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 YARSP54577 528 aaKnown RBP16.49■□□□□ 0.23
SPG7-210ENST00000564409 PEX3P56589 373 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 NAB2Q15742 525 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 NT5DC1Q5TFE4 455 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 EEF1DP3Q658K8 133 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 RINT1Q6NUQ1 792 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 C1orf186Q6ZWK4 172 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 NXPE3Q969Y0 559 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 NTPCRQ9BSD7 190 aaKnown RBP16.49■□□□□ 0.23
SPG7-210ENST00000564409 MRPL4Q9BYD3 311 aaKnown RBP16.49■□□□□ 0.23
SPG7-210ENST00000564409 ARHGAP28Q9P2N2 729 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 DOCK8Q8NF50 2099 aa16.49■□□□□ 0.23
SPG7-210ENST00000564409 E9PMD0 336 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 TGM5O43548 720 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 TRAPPC3O43617 180 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 HIP1RO75146 1068 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 GRM5P41594 1212 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 TDGQ13569 410 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 IL17AQ16552 155 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 FAM171A1Q5VUB5 890 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 DCLRE1AQ6PJP8 1040 aa16.48■□□□□ 0.23
SPG7-210ENST00000564409 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms