RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 KNOP1Q1ED39 458 aaKnown RBP18.22■□□□□ 0.51
RNF40-206ENST00000564260 C12orf56Q8IXR9 622 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 DEFB123Q8N688 67 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 FBXO22Q8NEZ5 403 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 SCFD1Q8WVM8 642 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 ZNF558Q96NG5 402 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 FAM193BQ96PV7 902 aaPredicted RBP18.22■□□□□ 0.51
RNF40-206ENST00000564260 GAD1Q99259 594 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 MSTO1Q9BUK6 570 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 SLC38A7Q9NVC3 462 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 SNTG2Q9NY99 539 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 LZTS1Q9Y250 596 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 HES2Q9Y543 173 aa18.22■□□□□ 0.51
RNF40-206ENST00000564260 MEIS3P2A8K0S8 358 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 FAM189A1O60320 539 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 THP07101 528 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 ADRB2P07550 413 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 KCNE1P15382 129 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 CASP1P29466 404 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 CTNNB1P35222 781 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 MLH1P40692 756 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 MATR3P43243 847 aaKnown RBP eCLIP18.21■□□□□ 0.51
RNF40-206ENST00000564260 ALDH7A1P49419 539 aaKnown RBP18.21■□□□□ 0.51
RNF40-206ENST00000564260 PLCB3Q01970 1234 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 DSC1Q08554 894 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 MYBPC2Q14324 1141 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 PAN2Q504Q3 1202 aaKnown RBP18.21■□□□□ 0.51
RNF40-206ENST00000564260 SLC39A4Q6P5W5 647 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 ALKAL1Q6UXT8 129 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 GUF1Q8N442 669 aaKnown RBP18.21■□□□□ 0.51
RNF40-206ENST00000564260 GSTCDQ8NEC7 633 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 POMGNT1Q8WZA1 660 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 SMARCE1Q969G3 411 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 SLC39A2Q9NP94 309 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 LMBRD1Q9NUN5 540 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 MTMR10Q9NXD2 777 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 CNTN3Q9P232 1028 aa18.21■□□□□ 0.51
RNF40-206ENST00000564260 AGO2Q9UKV8 859 aaKnown RBP18.21■□□□□ 0.51
RNF40-206ENST00000564260 RALGAPA2Q2PPJ7 1873 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 XPOTO43592 962 aaKnown RBP18.2■□□□□ 0.5
RNF40-206ENST00000564260 PRPF6O94906 941 aaKnown RBP18.2■□□□□ 0.5
RNF40-206ENST00000564260 PRR29P0C7W0 189 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
RNF40-206ENST00000564260 AKAP5P24588 427 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 GATMP50440 423 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 STK4Q13043 487 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 PTPROQ16827 1216 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 SPOUT1Q5T280 376 aaKnown RBP18.2■□□□□ 0.5
RNF40-206ENST00000564260 KCNT2Q6UVM3 1135 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 LRRC55Q6ZSA7 311 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 ZBTB33Q86T24 672 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 NT5DC4Q86YG4 428 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 COLGALT1Q8NBJ5 622 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 KIAA0895Q8NCT3 520 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 ZBTB45Q96K62 511 aaPredicted RBP18.2■□□□□ 0.5
RNF40-206ENST00000564260 SNX27Q96L92 541 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 UROC1Q96N76 676 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 GAS2L1Q99501 681 aaPredicted RBP18.2■□□□□ 0.5
RNF40-206ENST00000564260 C17orf80Q9BSJ5 609 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 ASB7Q9H672 318 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 CPSF3Q9UKF6 684 aaKnown RBP18.2■□□□□ 0.5
RNF40-206ENST00000564260 INPP5FQ9Y2H2 1132 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 USP20Q9Y2K6 914 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 DERAQ9Y315 318 aa18.2■□□□□ 0.5
RNF40-206ENST00000564260 FNDC1Q4ZHG4 1894 aaPredicted RBP18.2■□□□□ 0.5
RNF40-206ENST00000564260 PDXKO00764 312 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 ARHGEF15O94989 841 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 MBD3O95983 291 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 ALDH2P05091 517 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 ADSSP30520 456 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 KRT17Q04695 432 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 KCNA1Q09470 495 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 TUSC3Q13454 348 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 PNOCQ13519 176 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 NFIL3Q16649 462 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 TPRNQ4KMQ1 711 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 ZNF658Q5TYW1 1059 aaPredicted RBP18.19■□□□□ 0.5
RNF40-206ENST00000564260 PDE12Q6L8Q7 609 aaKnown RBP18.19■□□□□ 0.5
RNF40-206ENST00000564260 ARMCX5Q6P1M9 558 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 THNSL1Q8IYQ7 743 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 TRIML1Q8N9V2 468 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 ARNTL2Q8WYA1 636 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 GBF1Q92538 1859 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 ZFP42Q96MM3 310 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 APOL6Q9BWW8 343 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 FGFBP2Q9BYJ0 223 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 RPF1Q9H9Y2 349 aaKnown RBP18.19■□□□□ 0.5
RNF40-206ENST00000564260 SPG21Q9NZD8 308 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 PCDHA5Q9Y5H7 936 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 SZT2Q5T011 3432 aa18.19■□□□□ 0.5
RNF40-206ENST00000564260 CHD7Q9P2D1 2997 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.18■□□□□ 0.5
RNF40-206ENST00000564260 TTC26A0AVF1 554 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 ANKRD63C9JTQ0 380 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 IL18RAPO95256 599 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 PTMSP20962 102 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 PAX3P23760 479 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 SCNN1GP51170 649 aa18.18■□□□□ 0.5
RNF40-206ENST00000564260 BCAR1P56945 870 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms