RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 STAMBPL1Q96FJ0 436 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 TBCBQ99426 244 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CALN1Q9BXU9 219 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 RHOBTB2Q9BYZ6 727 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 ZBTB21Q9ULJ3 1066 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 DNM3Q9UQ16 869 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 SNX9Q9Y5X1 595 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 POLR3AO14802 1390 aaPredicted RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 COL16A1Q07092 1604 aaPredicted RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CCDC69A6NI79 296 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 H3BQF6 201 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 ATMINO43313 823 aaPredicted RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 NIPSNAP2O75323 286 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 NR1I2O75469 434 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 FKBP9O95302 570 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 P4HBP07237 508 aaKnown RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CCND1P24385 295 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 LMOD1P29536 600 aaPredicted RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 SOX6P35712 828 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 DHX9Q08211 1270 aaKnown RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CWF19L2Q2TBE0 894 aaKnown RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 C11orf88Q6PI97 169 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 ZYG11AQ6WRX3 759 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CYP4V2Q6ZWL3 525 aaPredicted RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 PODNQ7Z5L7 613 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 C16orf71Q8IYS4 520 aaPredicted RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 XXYLT1Q8NBI6 393 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 TCEANC2Q96MN5 208 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 FTOQ9C0B1 505 aaKnown RBP eCLIP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 INIPQ9NRY2 104 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 ARMC1Q9NVT9 282 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 STK38LQ9Y2H1 464 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 HEY1Q9Y5J3 304 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CCDC85CA6NKD9 419 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 PSMD9O00233 223 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 F13A1P00488 732 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 LTA4HP09960 611 aaKnown RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 ACTN1P12814 892 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CRABP2P29373 138 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 IDUAP35475 653 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 IST1P53990 364 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 SMARCB1Q12824 385 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 TSC22D1Q15714 1073 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 NFE2Q16621 373 aaPredicted RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 MINDY4Q4G0A6 757 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 ERICH5Q6P6B1 374 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 ELMSAN1Q6PJG2 1045 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 AGMOQ6ZNB7 445 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 NKAIN3Q8N8D7 197 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 DNAAF3Q8N9W5 541 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CPLX3Q8WVH0 158 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 LRRC59Q96AG4 307 aaKnown RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 RRP36Q96EU6 259 aaKnown RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 KCNF1Q9H3M0 494 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 VTA1Q9NP79 307 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CTTNBP2NLQ9P2B4 639 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 USP16Q9Y5T5 823 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 CHD2O14647 1828 aaKnown RBP6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 UBN2Q6ZU65 1347 aa6.3□□□□□ -1.4
TUBGCP4-207ENST00000563963 POP4O95707 220 aaKnown RBP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 ADH7P40394 386 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 CCR3P51677 355 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 FOXK1P85037 733 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 EXOSC10Q01780 885 aaKnown RBP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 CTDSPL2Q05D32 466 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 CACNB2Q08289 660 aaPredicted RBP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 MORC3Q14149 939 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 PPP2R5DQ14738 602 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 PPA1Q15181 289 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 NONOQ15233 471 aaKnown RBP eCLIP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 EPHA7Q15375 998 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 SYDE2Q5VT97 1194 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 TMEM154Q6P9G4 183 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 C3orf62Q6ZUJ4 267 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 BNIPLQ7Z465 357 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 DNAJB7Q7Z6W7 309 aaPredicted RBP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 CCNYL1Q8N7R7 359 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 TEX47Q8TBZ9 253 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 INPP5DQ92835 1189 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 NUP58Q9BVL2 599 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 LMAN2LQ9H0V9 348 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 WNT5BQ9H1J7 359 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 FAM114A2Q9NRY5 505 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 FANCLQ9NW38 375 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 PAG1Q9NWQ8 432 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 DPP7Q9UHL4 492 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 NOB1Q9ULX3 412 aaKnown RBP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 SNX6Q9UNH7 406 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 NOS1P29475 1434 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 MAP3K19Q56UN5 1328 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 TTC41PQ6P2S7 1318 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 ZSCAN5BA6NJL1 495 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 TMEM88BA6NKF7 163 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 TMEM114B3SHH9 223 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 MZF1P28698 734 aaPredicted RBP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 HSPA9P38646 679 aaKnown RBP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 IGHMBP2P38935 993 aaKnown RBP6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 KCNJ6P48051 423 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 CAP1Q01518 475 aa6.29□□□□□ -1.4
TUBGCP4-207ENST00000563963 PTCH1Q13635 1447 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms