RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 ITIH6Q6UXX5 1313 aa21.02■□□□□ 0.96
SPSB3-204ENST00000563741 AFPP02771 609 aaKnown RBP21.02■□□□□ 0.96
SPSB3-204ENST00000563741 TRIM49P0CI25 452 aa21.02■□□□□ 0.96
SPSB3-204ENST00000563741 TRIM49CP0CI26 452 aa21.02■□□□□ 0.96
SPSB3-204ENST00000563741 KRT13P13646 458 aa21.02■□□□□ 0.96
SPSB3-204ENST00000563741 MCCD1P59942 119 aaPredicted RBP21.02■□□□□ 0.96
SPSB3-204ENST00000563741 PCBP1Q15365 356 aaKnown RBP eCLIP21.02■□□□□ 0.96
SPSB3-204ENST00000563741 CRELD2Q6UXH1 353 aaPredicted RBP21.02■□□□□ 0.96
SPSB3-204ENST00000563741 CPB2Q96IY4 423 aa21.02■□□□□ 0.96
SPSB3-204ENST00000563741 CDT1Q9H211 546 aa21.02■□□□□ 0.96
SPSB3-204ENST00000563741 TRPV2Q9Y5S1 764 aa21.02■□□□□ 0.96
SPSB3-204ENST00000563741 CDY2AQ9Y6F7 541 aa21.02■□□□□ 0.96
SPSB3-204ENST00000563741 M0QZ92 97 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 CTSHP09668 335 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 SFPQP23246 707 aaKnown RBP eCLIP21.01■□□□□ 0.95
SPSB3-204ENST00000563741 ACOT2P49753 483 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 VAMP7P51809 220 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 DLG4P78352 724 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 CYP24A1Q07973 514 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 PPIGQ13427 754 aaKnown RBP eCLIP21.01■□□□□ 0.956e-7■■□□□ 11.8
SPSB3-204ENST00000563741 SYCP1Q15431 976 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 TRIM71Q2Q1W2 868 aaKnown RBP21.01■□□□□ 0.95
SPSB3-204ENST00000563741 CATSPER4Q7RTX7 472 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 MFSD14AQ96MC6 490 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 IMPACTQ9P2X3 320 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 A0A1B0GUA9 196 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 ZNF233A6NK53 670 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 LDHAP00338 332 aaKnown RBP21.01■□□□□ 0.95
SPSB3-204ENST00000563741 CHRNA1P02708 482 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 PTMAP06454 111 aaKnown RBP21.01■□□□□ 0.95
SPSB3-204ENST00000563741 HOXA11P31270 313 aaPredicted RBP21.01■□□□□ 0.95
SPSB3-204ENST00000563741 THPOP40225 353 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 FXR1P51114 621 aaKnown RBP eCLIP21.01■□□□□ 0.95
SPSB3-204ENST00000563741 MGAT3Q09327 533 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 C1orf220Q5T0J3 134 aa21.01■□□□□ 0.95
SPSB3-204ENST00000563741 UMODL1Q5DID0 1318 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 GOLGA6L6A8MZA4 724 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 RBAK-RBAKDNI3L0D1 243 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 OGTO15294 1046 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 EPHB4P54760 987 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 TBX2Q13207 712 aaPredicted RBP21■□□□□ 0.95
SPSB3-204ENST00000563741 SEZ6Q53EL9 994 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 PARD3BQ8TEW8 1205 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 AGPAT5Q9NUQ2 364 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 SIK3Q9Y2K2 1263 aa21■□□□□ 0.95
SPSB3-204ENST00000563741 CSF2RAP15509 400 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 TNFSF9P41273 254 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 KLK7P49862 253 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 BFSP2Q13515 415 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 HSP90AA2PQ14568 343 aaPredicted RBP20.99■□□□□ 0.95
SPSB3-204ENST00000563741 SHHQ15465 462 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 LRIT3Q3SXY7 679 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 CCDC186Q7Z3E2 898 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 CEP120Q8N960 986 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 TMC2Q8TDI7 906 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 CCDC127Q96BQ5 260 aa20.99■□□□□ 0.95
SPSB3-204ENST00000563741 RBAKQ9NYW8 714 aaPredicted RBP20.99■□□□□ 0.95
SPSB3-204ENST00000563741 MCF2P10911 925 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 CCL23P55773 120 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 WNT7BP56706 349 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 ENPEPQ07075 957 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 CBWD6Q4V339 395 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 CBWD3Q5JTY5 395 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 CBWD5Q5RIA9 395 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 C9orf50Q5SZB4 431 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 FAM228AQ86W67 206 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 WNT8AQ9H1J5 351 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 CPSF3Q9UKF6 684 aaKnown RBP20.98■□□□□ 0.95
SPSB3-204ENST00000563741 LRRIQ3A6PVS8 624 aaPredicted RBP20.98■□□□□ 0.95
SPSB3-204ENST00000563741 PITPNM1O00562 1244 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 GYPCP04921 128 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 FMO5P49326 533 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 PPP3CAQ08209 521 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 PSMD6Q15008 389 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 BRSK2Q8IWQ3 736 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 THNSL1Q8IYQ7 743 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 CRACR2AQ9BSW2 395 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 IL23AQ9NPF7 189 aa20.98■□□□□ 0.95
SPSB3-204ENST00000563741 NOC2LQ9Y3T9 749 aaKnown RBP20.98■□□□□ 0.95
SPSB3-204ENST00000563741 RANBP2P49792 3224 aaKnown RBP20.97■□□□□ 0.95
SPSB3-204ENST00000563741 CAND2O75155 1236 aa20.97■□□□□ 0.95
SPSB3-204ENST00000563741 NCBP1Q09161 790 aaKnown RBP20.97■□□□□ 0.95
SPSB3-204ENST00000563741 KCNMA1Q12791 1236 aa20.97■□□□□ 0.95
SPSB3-204ENST00000563741 ARID5BQ14865 1188 aa20.97■□□□□ 0.95
SPSB3-204ENST00000563741 NOTUMQ6P988 496 aa20.97■□□□□ 0.95
SPSB3-204ENST00000563741 USP37Q86T82 979 aa20.97■□□□□ 0.95
SPSB3-204ENST00000563741 CAGE1Q8TC20 777 aa20.97■□□□□ 0.95
SPSB3-204ENST00000563741 MMRN2Q9H8L6 949 aa20.97■□□□□ 0.95
SPSB3-204ENST00000563741 TOPORSQ9NS56 1045 aaPredicted RBP20.97■□□□□ 0.95
SPSB3-204ENST00000563741 PIN4Q9Y237 131 aaKnown RBP20.97■□□□□ 0.95
SPSB3-204ENST00000563741 GTPBP10A4D1E9 387 aaKnown RBP20.96■□□□□ 0.95
SPSB3-204ENST00000563741 DLATP10515 647 aaKnown RBP20.96■□□□□ 0.95
SPSB3-204ENST00000563741 AXLP30530 894 aa20.96■□□□□ 0.95
SPSB3-204ENST00000563741 GSDMDP57764 484 aa20.96■□□□□ 0.95
SPSB3-204ENST00000563741 POP1Q99575 1024 aaKnown RBP20.96■□□□□ 0.95
SPSB3-204ENST00000563741 ADPGKQ9BRR6 497 aa20.96■□□□□ 0.95
SPSB3-204ENST00000563741 TTYH3Q9C0H2 523 aa20.96■□□□□ 0.95
SPSB3-204ENST00000563741 PDE11AQ9HCR9 933 aa20.96■□□□□ 0.95
SPSB3-204ENST00000563741 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.96■□□□□ 0.952e-6■□□□□ 9.8
SPSB3-204ENST00000563741 GCLMP48507 274 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms