RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 ZBTB45Q96K62 511 aaPredicted RBP31.05■■■□□ 2.56
NME3-203ENST00000563367 RPS6KC1Q96S38 1066 aa31.05■■■□□ 2.56
NME3-203ENST00000563367 ZHX3Q9H4I2 956 aa31.05■■■□□ 2.56
NME3-203ENST00000563367 C2orf71A6NGG8 1288 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 MYMKA6NI61 221 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 F8W810 466 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 STAT6P42226 847 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 DNM1Q05193 864 aaKnown RBP31.04■■■□□ 2.56
NME3-203ENST00000563367 SMC1AQ14683 1233 aaKnown RBP31.04■■■□□ 2.56
NME3-203ENST00000563367 AXDND1Q5T1B0 1012 aaPredicted RBP31.04■■■□□ 2.56
NME3-203ENST00000563367 PDILTQ8N807 584 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 MRPL43Q8N983 215 aaKnown RBP31.04■■■□□ 2.56
NME3-203ENST00000563367 VN1R2Q8NFZ6 395 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 AUTS2Q8WXX7 1259 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 NECAB3Q96P71 396 aaPredicted RBP31.04■■■□□ 2.56
NME3-203ENST00000563367 FIZ1Q96SL8 496 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 CACNG4Q9UBN1 327 aa31.04■■■□□ 2.56
NME3-203ENST00000563367 NCOR1O75376 2440 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 CUTAO60888 179 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 TBCAO75347 108 aaKnown RBP31.03■■■□□ 2.56
NME3-203ENST00000563367 BRD1O95696 1058 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 CXCL14O95715 111 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 SHC4Q6S5L8 630 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 MPZL3Q6UWV2 235 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 SV2BQ7L1I2 683 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 APBB1IPQ7Z5R6 666 aaPredicted RBP31.03■■■□□ 2.56
NME3-203ENST00000563367 RABGGTAQ92696 567 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 KCNN1Q92952 543 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 CLEC1BQ9P126 229 aa31.03■■■□□ 2.56
NME3-203ENST00000563367 H0YCG3 227 aa31.02■■■□□ 2.56
NME3-203ENST00000563367 TRAK2O60296 914 aa31.02■■■□□ 2.56
NME3-203ENST00000563367 CTSAP10619 480 aa31.02■■■□□ 2.56
NME3-203ENST00000563367 GRM5P41594 1212 aa31.02■■■□□ 2.56
NME3-203ENST00000563367 CLUL1Q15846 466 aa31.02■■■□□ 2.56
NME3-203ENST00000563367 ATL3Q6DD88 541 aa31.02■■■□□ 2.56
NME3-203ENST00000563367 PTCRAQ6ISU1 281 aaPredicted RBP31.02■■■□□ 2.56
NME3-203ENST00000563367 DDX12PQ92771 950 aa31.02■■■□□ 2.56
NME3-203ENST00000563367 CDCA3Q99618 268 aaPredicted RBP31.02■■■□□ 2.56
NME3-203ENST00000563367 TCHPQ9BT92 498 aa31.02■■■□□ 2.56
NME3-203ENST00000563367 K7ENM7 598 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 MCF2P10911 925 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 NMT1P30419 496 aaKnown RBP31.01■■■□□ 2.55
NME3-203ENST00000563367 NDUFV1P49821 464 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 OSTNP61366 133 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 NAB2Q15742 525 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 KCNG4Q8TDN1 519 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 DNAJC19Q96DA6 116 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 CHAMP1Q96JM3 812 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 PAAF1Q9BRP4 392 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 TBX20Q9UMR3 447 aa31.01■■■□□ 2.55
NME3-203ENST00000563367 PDCD11Q14690 1871 aaKnown RBP31.01■■■□□ 2.55
NME3-203ENST00000563367 GRXCR2A6NFK2 248 aa31■■■□□ 2.55
NME3-203ENST00000563367 TOM1L1O75674 476 aa31■■■□□ 2.55
NME3-203ENST00000563367 EFEMP2O95967 443 aa31■■■□□ 2.55
NME3-203ENST00000563367 THP07101 528 aa31■■■□□ 2.55
NME3-203ENST00000563367 KCNC3Q14003 757 aa31■■■□□ 2.55
NME3-203ENST00000563367 ZPBP2Q6X784 338 aa31■■■□□ 2.55
NME3-203ENST00000563367 TAS1R1Q7RTX1 841 aa31■■■□□ 2.55
NME3-203ENST00000563367 UHRF1Q96T88 793 aaPredicted RBP31■■■□□ 2.55
NME3-203ENST00000563367 ANKFY1Q9P2R3 1169 aa31■■■□□ 2.55
NME3-203ENST00000563367 CFAP45Q9UL16 551 aa31■■■□□ 2.55
NME3-203ENST00000563367 BARX2Q9UMQ3 279 aaPredicted RBP31■■■□□ 2.55
NME3-203ENST00000563367 PCDHA7Q9UN72 937 aa31■■■□□ 2.55
NME3-203ENST00000563367 HARSP12081 509 aaKnown RBP30.99■■■□□ 2.55
NME3-203ENST00000563367 IL9P15248 144 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 CA8P35219 290 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 TUSC3Q13454 348 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 FAM178BQ8IXR5 827 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 MSLNLQ96KJ4 702 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 CCDC94Q9BW85 323 aaPredicted RBP30.99■■■□□ 2.55
NME3-203ENST00000563367 COLEC11Q9BWP8 271 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 HAPLN2Q9GZV7 340 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 RCOR1Q9UKL0 485 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 IRAK3Q9Y616 596 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 C5orf42Q9H799 3197 aa30.99■■■□□ 2.55
NME3-203ENST00000563367 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP30.98■■■□□ 2.55
NME3-203ENST00000563367 CLASP2O75122 1294 aaKnown RBP30.98■■■□□ 2.55
NME3-203ENST00000563367 NR1I2O75469 434 aa30.98■■■□□ 2.55
NME3-203ENST00000563367 BMS1Q14692 1282 aaKnown RBP30.98■■■□□ 2.55
NME3-203ENST00000563367 E2F4Q16254 413 aa30.98■■■□□ 2.55
NME3-203ENST00000563367 GLRA4Q5JXX5 417 aa30.98■■■□□ 2.55
NME3-203ENST00000563367 ALKAL1Q6UXT8 129 aa30.98■■■□□ 2.55
NME3-203ENST00000563367 SFR1Q86XK3 245 aa30.98■■■□□ 2.55
NME3-203ENST00000563367 CASTOR2A6NHX0 329 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 MEFVO15553 781 aaPredicted RBP30.97■■■□□ 2.55
NME3-203ENST00000563367 ME1P48163 572 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 GTF2BQ00403 316 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 NOLC1Q14978 699 aaKnown RBP eCLIP30.97■■■□□ 2.55
NME3-203ENST00000563367 PTPN14Q15678 1187 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 SEZ6Q53EL9 994 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 ZC2HC1CQ53FD0 456 aaPredicted RBP30.97■■■□□ 2.55
NME3-203ENST00000563367 LLGL2Q6P1M3 1020 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 RNF168Q8IYW5 571 aaPredicted RBP30.97■■■□□ 2.55
NME3-203ENST00000563367 STAMQ92783 540 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 BICD1Q96G01 975 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 PPP1R10Q96QC0 940 aaKnown RBP30.97■■■□□ 2.55
NME3-203ENST00000563367 CD207Q9UJ71 328 aa30.97■■■□□ 2.55
NME3-203ENST00000563367 CLDN3O15551 220 aa30.96■■■□□ 2.55
NME3-203ENST00000563367 SOD2P04179 222 aa30.96■■■□□ 2.55
NME3-203ENST00000563367 SCP2P22307 547 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms