RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ADCY7P51828 1080 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 NAPAP54920 295 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 SETQ01105 290 aaPredicted RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 RING1Q06587 406 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 USP41Q3LFD5 358 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 RTP2Q5QGT7 225 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 STPG1Q5TH74 334 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 TANGO2Q6ICL3 276 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 PRSS55Q6UWB4 352 aaPredicted RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 CATSPER4Q7RTX7 472 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 RHPN2Q8IUC4 686 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 SMC5Q8IY18 1101 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 FANCBQ8NB91 859 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 GSTCDQ8NEC7 633 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 GATA6Q92908 595 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 GAD1Q99259 594 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 CLSTN3Q9BQT9 956 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 SH2D3AQ9BRG2 576 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 LSM14BQ9BX40 385 aaKnown RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 MINDY3Q9H8M7 445 aa8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 DNMT3BQ9UBC3 853 aaKnown RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 NDRG2Q9UN36 371 aaKnown RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 MRPS17Q9Y2R5 130 aaKnown RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 NUP210Q8TEM1 1887 aaPredicted RBP8.68□□□□□ -1.02
HERPUD1-206ENST00000563343 SMCO2A6NFE2 343 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 ARL5CA6NH57 179 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 TAF4O00268 1085 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 ADAM12O43184 909 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 TOP3BO95985 862 aaKnown RBP8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 CIITAP33076 1130 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 MLH1P40692 756 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 LIFRP42702 1097 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 SCNN1GP51170 649 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 SLC5A9Q2M3M2 681 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 MTERF2Q49AM1 385 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 WDR44Q5JSH3 913 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 PLA2G2CQ5R387 149 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 JAKMIP3Q5VZ66 844 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 HS6ST3Q8IZP7 471 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 ING5Q8WYH8 240 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 ELSPBP1Q96BH3 223 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 LMAN1LQ9HAT1 526 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 DISC1Q9NRI5 854 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 BARHL2Q9NY43 387 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 SUCLA2Q9P2R7 463 aaPredicted RBP8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 ADAM28Q9UKQ2 775 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 KCNH3Q9ULD8 1083 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 SAMM50Q9Y512 469 aa8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 SMG1Q96Q15 3661 aaKnown RBP8.67□□□□□ -1.02
HERPUD1-206ENST00000563343 ATG2BQ96BY7 2078 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 NCANO14594 1321 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 TMEM8BA6NDV4 472 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 MAN2B1O00754 1011 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 GIPC1O14908 333 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 PRC1O43663 620 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 MAFO75444 373 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 CALM1P0DP23 149 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 CALM2P0DP24 149 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 CALM3P0DP25 149 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 SPINK2P20155 84 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 CXCL12P48061 93 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 CREMQ03060 361 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 PTGDRQ13258 359 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 PPP2R5DQ14738 602 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 CCDC6Q16204 474 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 AASDHQ4L235 1098 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 PPM1LQ5SGD2 360 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 PSAPL1Q6NUJ1 521 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 B3GNT9Q6UX72 402 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 SGMS1Q86VZ5 419 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 LONP2Q86WA8 852 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 MAP4K3Q8IVH8 894 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 TMTC2Q8N394 836 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 LNX1Q8TBB1 728 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 PIK3R5Q8WYR1 880 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 MCRS1Q96EZ8 462 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 TMEM87BQ96K49 555 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 ZFP42Q96MM3 310 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 NLRP4Q96MN2 994 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 COLEC11Q9BWP8 271 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 EIF2AQ9BY44 585 aaKnown RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 ADAM33Q9BZ11 813 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 ARRDC1-AS1Q9H2J1 176 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 UNC45AQ9H3U1 944 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 UBN1Q9NPG3 1134 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 TRPV5Q9NQA5 729 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 AVENQ9NQS1 362 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 C2orf42Q9NWW7 574 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 SEPT9Q9UHD8 586 aaPredicted RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 LHX6Q9UPM6 363 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 IPPQ9Y573 584 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 FREM2Q5SZK8 3169 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 LAMA5O15230 3695 aa8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 TNRC6BQ9UPQ9 1833 aaKnown RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 FLNBO75369 2602 aaKnown RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 HELZ2Q9BYK8 2649 aaKnown RBP8.66□□□□□ -1.02
HERPUD1-206ENST00000563343 CCDC69A6NI79 296 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 hCG_1984214I3L0E3 225 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms