RNA–Protein interactions for RNA: ENST00000563240.1

LPCAT4-204, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 939 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-204ENST00000563240 TUSC3Q13454 348 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 DHX8Q14562 1220 aaKnown RBP16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 GLRA4Q5JXX5 417 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 KIAA0319Q5VV43 1072 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 SPATA31D4Q6ZUB0 917 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 ZBTB33Q86T24 672 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 DRC1Q96MC2 740 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 RIPOR3Q96MK2 946 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 TARS2Q9BW92 718 aaKnown RBP16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 FOXD4L1Q9NU39 408 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 ADAM28Q9UKQ2 775 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 SSX2IPQ9Y2D8 614 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 C5orf42Q9H799 3197 aa16.78■□□□□ 0.28
LPCAT4-204ENST00000563240 NPHP3-ACAD11A0A0J9YXS1 232 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 EFEMP2O95967 443 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 THP07101 528 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 ADH1AP07327 375 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 PLA2G4BP0C869 781 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 RPL17P18621 184 aaKnown RBP16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 MTHFRP42898 656 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 DSG1Q02413 1049 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 DCAF4L1Q3SXM0 396 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 ARL6IP4Q66PJ3 421 aaKnown RBP16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 PALB2Q86YC2 1186 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 RNF168Q8IYW5 571 aaPredicted RBP16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 SYT2Q8N9I0 419 aaPredicted RBP16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 RIN2Q8WYP3 895 aaPredicted RBP16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 EDAQ92838 391 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 NECTIN4Q96NY8 510 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 TCHPQ9BT92 498 aa16.77■□□□□ 0.28
LPCAT4-204ENST00000563240 C2CD4DB7Z1M9 353 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 HARSP12081 509 aaKnown RBP16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 UBA7P41226 1012 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 GRIN1Q05586 938 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 CUL4AQ13619 759 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 USP41Q3LFD5 358 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 HYIQ5T013 277 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 PRSS55Q6UWB4 352 aaPredicted RBP16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 HFE2Q6ZVN8 426 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 TAS1R3Q7RTX0 852 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 CEP57Q86XR8 500 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 CEP120Q8N960 986 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 ACO2Q99798 780 aaKnown RBP16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 MRPL4Q9BYD3 311 aaKnown RBP16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 BACH2Q9BYV9 841 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 NT5C3AQ9H0P0 336 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 TMEM134Q9H6X4 195 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 SFXN1Q9H9B4 322 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 MAN1C1Q9NR34 630 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 CHST7Q9NS84 486 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 TNFSF13BQ9Y275 285 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 NR2E1Q9Y466 385 aa16.76■□□□□ 0.27
LPCAT4-204ENST00000563240 PHLPP2Q6ZVD8 1323 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 KIF4AO95239 1232 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 GLUD1P00367 558 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 IGFBP6P24592 240 aaPredicted RBP16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 GUCY2CP25092 1073 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 SLC12A3P55017 1021 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 ZXDAP98168 799 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 ZNF568Q3ZCX4 644 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 TRIM67Q6ZTA4 783 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 BRAPQ7Z569 592 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 APBB1IPQ7Z5R6 666 aaPredicted RBP16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 GPR149Q86SP6 731 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 RASSF8Q8NHQ8 419 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 ZBTB45Q96K62 511 aaPredicted RBP16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 CDT1Q9H211 546 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 RXFP1Q9HBX9 757 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 ARHGAP28Q9P2N2 729 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 RBM19Q9Y4C8 960 aaKnown RBP16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 ZMYM2Q9UBW7 1377 aa16.75■□□□□ 0.27
LPCAT4-204ENST00000563240 PLS3P13797 630 aa16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 STRN3Q13033 797 aa16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 KARSQ15046 597 aaKnown RBP16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 NAB2Q15742 525 aa16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 TMEM119Q4V9L6 283 aa16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 RTP2Q5QGT7 225 aa16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 CALML4Q96GE6 196 aa16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 LIMD1Q9UGP4 676 aa16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 CLIC4Q9Y696 253 aa16.74■□□□□ 0.27
LPCAT4-204ENST00000563240 SF3B1O75533 1304 aaKnown RBP eCLIP16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 TDRD15B5MCY1 1934 aaKnown RBP16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 CCDC195A0A1B0GUA6 201 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 TMEM221A6NGB7 291 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 M0R296 226 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 RFPL2O75678 378 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 ASGR2P07307 311 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 CLCNKBP51801 687 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 SMTNP53814 917 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 YARSP54577 528 aaKnown RBP16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 CEBPZQ03701 1054 aaKnown RBP16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 PTPN21Q16825 1174 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 SEZ6Q53EL9 994 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 SPECC1Q5M775 1068 aa16.73■□□□□ 0.27
LPCAT4-204ENST00000563240 FAM173BQ6P4H8 233 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms