RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 USP37Q86T82 979 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 NLRP7Q8WX94 980 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 CNTNAP2Q9UHC6 1331 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 SSU72P8A0A1W2PR75 194 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 GOLGA6L9A6NEM1 432 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 PNMA6AP0CW24 399 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-208ENST00000563220 CCND3P30281 292 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-208ENST00000563220 ASIC2Q16515 512 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 SLC9C1Q4G0N8 1177 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 GNASQ5JWF2 1037 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 MPZL3Q6UWV2 235 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 ARHGEF19Q8IW93 802 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 MYRIPQ8NFW9 859 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 TAS1R2Q8TE23 839 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 STK33Q9BYT3 514 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 GPR88Q9GZN0 384 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 FAM49AQ9H0Q0 323 aaPredicted RBP19.56■□□□□ 0.72
COMMD4-208ENST00000563220 LZTFL1Q9NQ48 299 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 TNFSF13BQ9Y275 285 aa19.56■□□□□ 0.72
COMMD4-208ENST00000563220 ARHGAP25P42331 645 aa19.55■□□□□ 0.72
COMMD4-208ENST00000563220 CYP27A1Q02318 531 aa19.55■□□□□ 0.72
COMMD4-208ENST00000563220 DRAP1Q14919 205 aaPredicted RBP19.55■□□□□ 0.72
COMMD4-208ENST00000563220 C15orf39Q6ZRI6 1047 aa19.55■□□□□ 0.72
COMMD4-208ENST00000563220 FNBP1Q96RU3 617 aa19.55■□□□□ 0.72
COMMD4-208ENST00000563220 KATNAL1Q9BW62 490 aa19.55■□□□□ 0.72
COMMD4-208ENST00000563220 UPF3AQ9H1J1 476 aaKnown RBP19.55■□□□□ 0.72
COMMD4-208ENST00000563220 ADAMTS10Q9H324 1103 aa19.55■□□□□ 0.72
COMMD4-208ENST00000563220 HDAC6Q9UBN7 1215 aa19.55■□□□□ 0.72
COMMD4-208ENST00000563220 PTPRJQ12913 1337 aa19.55■□□□□ 0.72
COMMD4-208ENST00000563220 SMIM35A0A1B0GVV1 85 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 GPR25O00155 361 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 OGTO15294 1046 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 TREHO43280 583 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 ZEB2O60315 1214 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 CYP2C9P11712 490 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 PRKAR2AP13861 404 aaKnown RBP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 KIF11P52732 1056 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 KLHL30Q0D2K2 578 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 TMEM62Q0P6H9 643 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 ENOX2Q16206 610 aaKnown RBP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 KIZQ2M2Z5 673 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 TDRD12Q587J7 1177 aaKnown RBP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 ZNF592Q92610 1267 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 TFR2Q9UP52 801 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 GPR32O75388 356 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 C4BPAP04003 597 aaKnown RBP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 RARBP10826 455 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 TNNI1P19237 187 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 ETF1P62495 437 aaKnown RBP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 KRT83P78385 493 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 TMEM132AQ24JP5 1023 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 SYT10Q6XYQ8 523 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 ZNF410Q86VK4 478 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 BRSK2Q8IWQ3 736 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 FBXL13Q8NEE6 735 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 SCLT1Q96NL6 688 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 IRX2Q9BZI1 471 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 DEF6Q9H4E7 631 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 HAUS4Q9H6D7 363 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 CDHR5Q9HBB8 845 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 UBE2TQ9NPD8 197 aaPredicted RBP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 RAB20Q9NX57 234 aa19.54■□□□□ 0.72
COMMD4-208ENST00000563220 CPSF3Q9UKF6 684 aaKnown RBP19.54■□□□□ 0.72
COMMD4-208ENST00000563220 F8VZ95 297 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 KIF2AO00139 706 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-208ENST00000563220 AKR1B10O60218 316 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 LCA5LO95447 670 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 HOXD10P28358 340 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 GTF2F1P35269 517 aaKnown RBP eCLIP19.53■□□□□ 0.724e-9■■■■■ 28.7
COMMD4-208ENST00000563220 STAT1P42224 750 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 NKX3-2P78367 333 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 ARHGAP44Q17R89 818 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 ZNF568Q3ZCX4 644 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 THNSL1Q8IYQ7 743 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 CEP120Q8N960 986 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 CPB2Q96IY4 423 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 CDT1Q9H211 546 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 DAAM1Q9Y4D1 1078 aa19.53■□□□□ 0.72
COMMD4-208ENST00000563220 CENPFP49454 3210 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 C17orf102A2RUQ5 167 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 RCCD1A6NED2 376 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 KPNA6O60684 536 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 ADAMTS4O75173 837 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 GFPT2O94808 682 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 ARF4P18085 180 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-208ENST00000563220 FGFR4P22455 802 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 HOXC8P31273 242 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 SOX5P35711 763 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 GFPT1Q06210 699 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-208ENST00000563220 ZACNQ401N2 412 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 TDRD10Q5VZ19 366 aaKnown RBP19.52■□□□□ 0.72
COMMD4-208ENST00000563220 CXCL17Q6UXB2 119 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 SRGAP1Q7Z6B7 1085 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 DNAJB3Q8WWF6 145 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 KAT5Q92993 513 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 ELMO3Q96BJ8 720 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 CGRRF1Q99675 332 aa19.52■□□□□ 0.72
COMMD4-208ENST00000563220 MTG1Q9BT17 334 aaPredicted RBP19.52■□□□□ 0.72
COMMD4-208ENST00000563220 FOXN3O00409 490 aaPredicted RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 212.1 ms