RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ZBTB21Q9ULJ3 1066 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 NOB1Q9ULX3 412 aaKnown RBP4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 ANKRD6Q9Y2G4 727 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 GIT1Q9Y2X7 761 aa4.27□□□□□ -1.73
SHCBP1-202ENST00000563219 WDR33Q9C0J8 1336 aaKnown RBP4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 NRP1O14786 923 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 CYP27B1O15528 508 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 PEX14O75381 377 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 ZSCAN20P17040 1043 aaPredicted RBP4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 SLC16A1P53985 500 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 RIN1Q13671 783 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 TUBA3CQ13748 450 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 SAFB2Q14151 953 aaKnown RBP eCLIP4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 TUBA3EQ6PEY2 450 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 TMPRSS6Q8IU80 811 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 CCDC146Q8IYE0 955 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 LILRA3Q8N6C8 439 aaPredicted RBP4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 COA7Q96BR5 231 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 CHFRQ96EP1 664 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 HSPBAP1Q96EW2 488 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 ENKD1Q9H0I2 346 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 DMRT3Q9NQL9 472 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 ING3Q9NXR8 418 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 ZIM2Q9NZV7 527 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 CEP72Q9P209 647 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 IP6K2Q9UHH9 426 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 ZNF180Q9UJW8 692 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 PNMA8BQ9ULN7 279 aaPredicted RBP4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 SH3BP1Q9Y3L3 701 aa4.26□□□□□ -1.73
SHCBP1-202ENST00000563219 FAM171A2A8MVW0 826 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 CAPN14A8MX76 684 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 PRAMEF4O60810 478 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 SCGB1D2O95969 90 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 GASTP01350 101 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 GYPEP15421 78 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 RRP1BQ14684 758 aaKnown RBP4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 ACAP1Q15027 740 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 PPP2R5AQ15172 486 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 CCDC181Q5TID7 509 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 ZNF480Q8WV37 535 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 NRG4Q8WWG1 115 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 JPH3Q8WXH2 748 aaPredicted RBP4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 RPL10LQ96L21 214 aaKnown RBP4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 IKZF4Q9H2S9 585 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 PARPBPQ9NWS1 579 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 GPRC5DQ9NZD1 345 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 SAP30BPQ9UHR5 308 aaKnown RBP4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 IPPQ9Y573 584 aa4.25□□□□□ -1.73
SHCBP1-202ENST00000563219 A0A1W2PRX2 142 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 HTRA2O43464 458 aaPredicted RBP4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 TSPAN6O43657 245 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 AKR1B10O60218 316 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 ENDOD1O94919 500 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 PF4V1P10720 104 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 GSPT1P15170 499 aaKnown RBP4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 EDNRBP24530 442 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 AKAP5P24588 427 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 CRHR1P34998 444 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 TBX4P57082 545 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 KIF23Q02241 960 aaPredicted RBP4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 SEPT2Q15019 361 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 RRP12Q5JTH9 1297 aaKnown RBP4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 KRT40Q6A162 431 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 NXNQ6DKJ4 435 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 Q6ZVL8 140 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 C14orf80Q86SX3 495 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 CMTM4Q8IZR5 234 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 ANKRD35Q8N283 1001 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 MIER2Q8N344 545 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 PPM1NQ8N819 430 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 OR2I1PQ8NGU4 316 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 NEU4Q8WWR8 484 aaPredicted RBP4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 CCDC136Q96JN2 1154 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 MMRN2Q9H8L6 949 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 BCO1Q9HAY6 547 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 IL23AQ9NPF7 189 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 TRPS1Q9UHF7 1281 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 SERPINB13Q9UIV8 391 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 LIMCH1Q9UPQ0 1083 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 DNM3Q9UQ16 869 aa4.24□□□□□ -1.73
SHCBP1-202ENST00000563219 ITGA10O75578 1167 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 IL33O95760 270 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 PEX11BO96011 259 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 POU2F2P09086 479 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 U2AF1L5P0DN76 240 aaPredicted RBP4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 ATF3P18847 181 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 MAKP20794 623 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 ECHS1P30084 290 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 CYP2C19P33261 490 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 SREBF1P36956 1147 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 SLC6A9P48067 706 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 INHBCP55103 352 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 U2AF1Q01081 240 aaKnown RBP eCLIP4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 DUSP2Q05923 314 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 NOMO1Q15155 1222 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 FAM102BQ5T8I3 360 aa4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 CXorf57Q6NSI4 855 aaKnown RBP4.23□□□□□ -1.73
SHCBP1-202ENST00000563219 TCEAL8Q8IYN2 117 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms