RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 PLD4Q96BZ4 506 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 DYDC2Q96IM9 177 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 ZNF668Q96K58 619 aaPredicted RBP6.5□□□□□ -1.37
CDH13-206ENST00000562601 FAM20AQ96MK3 541 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 CITED4Q96RK1 184 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 SUGCTQ9HAC7 445 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 NRBP2Q9NSY0 501 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 RGL1Q9NZL6 768 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 WRAP73Q9P2S5 460 aaPredicted RBP6.5□□□□□ -1.37
CDH13-206ENST00000562601 GINS2Q9Y248 185 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.5□□□□□ -1.37
CDH13-206ENST00000562601 PCDHB6Q9Y5E3 794 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 PCDHA2Q9Y5H9 948 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 CDY2AQ9Y6F7 541 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 SLC4A7Q9Y6M7 1214 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 MICAL3Q7RTP6 2002 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 IGSF9BQ9UPX0 1349 aa6.5□□□□□ -1.37
CDH13-206ENST00000562601 ARID2Q68CP9 1835 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 VPS37CA5D8V6 355 aaPredicted RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 SOWAHDA6NJG2 315 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 J3QW42 95 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 K7ELQ4 463 aaPredicted RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 TBX3O15119 743 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 SMNDC1O75940 238 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDH13-206ENST00000562601 STBD1O95210 358 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 C22orf31O95567 290 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 CXCL10P02778 98 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 VTNP04004 478 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 GHRP10912 638 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 CES1P23141 567 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 U2AF2P26368 475 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDH13-206ENST00000562601 COL8A1P27658 744 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 CD52P31358 61 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 CLCN3P51790 818 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 NPEPPSP55786 919 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 DEFB103AP81534 67 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 MRPS6P82932 125 aaKnown RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 SPIRE1Q08AE8 756 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 MGAT3Q09327 533 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 PPP2R5CQ13362 524 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 LPIN1Q14693 890 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 EPHA7Q15375 998 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 TMEM266Q2M3C6 531 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 EFCAB12Q6NXP0 572 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 TAF2Q6P1X5 1199 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 CNKSR3Q6P9H4 555 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDH13-206ENST00000562601 RSPH3Q86UC2 560 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 FERMT3Q86UX7 667 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 WFDC8Q8IUA0 241 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 SLFN12Q8IYM2 578 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 KIAA0319LQ8IZA0 1049 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 DEFB123Q8N688 67 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 C4orf32Q8N8J7 132 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 DBF4BQ8NFT6 615 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 TNPO1Q92973 898 aaKnown RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 MTMR9Q96QG7 549 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 NACC1Q96RE7 527 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 EIF2AK1Q9BQI3 630 aaKnown RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 PBX4Q9BYU1 374 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 NKX2-4Q9H2Z4 354 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 TTC12Q9H892 705 aaPredicted RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 NOL7Q9UMY1 257 aaKnown RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 PCDHA12Q9UN75 941 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 AKT3Q9Y243 479 aa6.49□□□□□ -1.37
CDH13-206ENST00000562601 YBX2Q9Y2T7 364 aaKnown RBP6.49□□□□□ -1.37
CDH13-206ENST00000562601 MYO9BQ13459 2157 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 COL1A2P08123 1366 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 SMIM35A0A1B0GVV1 85 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 M0QZ92 97 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 PHACTR2O75167 634 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 CSDE1O75534 798 aaKnown RBP6.48□□□□□ -1.37
CDH13-206ENST00000562601 SLITRK3O94933 977 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 IGHA1P01876 353 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 P4HBP07237 508 aaKnown RBP6.48□□□□□ -1.37
CDH13-206ENST00000562601 PFKMP08237 780 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 OR52Z1P0C646 297 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 ATP2A2P16615 1042 aaKnown RBP6.48□□□□□ -1.37
CDH13-206ENST00000562601 QARSP47897 775 aaKnown RBP6.48□□□□□ -1.37
CDH13-206ENST00000562601 KCNJ6P48051 423 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 WDR5P61964 334 aaKnown RBP6.48□□□□□ -1.37
CDH13-206ENST00000562601 PSMC5P62195 406 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 SMAD3P84022 425 aaKnown RBP6.48□□□□□ -1.37
CDH13-206ENST00000562601 DRP2Q13474 957 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 IKBKEQ14164 716 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 IL17AQ16552 155 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 KIZQ2M2Z5 673 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 PLEKHG4Q58EX7 1191 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 XKR3Q5GH77 459 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 FBXO47Q5MNV8 452 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 ANO5Q75V66 913 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 DTWD1Q8N5C7 304 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 RDM1Q8NG50 284 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 FOXD4L4Q8WXT5 416 aaPredicted RBP6.48□□□□□ -1.37
CDH13-206ENST00000562601 SEPT8Q92599 483 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 FAM167AQ96KS9 214 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 LXNQ9BS40 222 aa6.48□□□□□ -1.37
CDH13-206ENST00000562601 IFIH1Q9BYX4 1025 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms