RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 L3MBTL3Q96JM7 780 aaPredicted RBP10.57□□□□□ -0.72
SMG1-205ENST00000561947 FAM167AQ96KS9 214 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 GDAP1L1Q96MZ0 367 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 TMEM134Q9H6X4 195 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 PPME1Q9Y570 386 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 ZC3H4Q9UPT8 1303 aaKnown RBP10.57□□□□□ -0.72
SMG1-205ENST00000561947 DDX3YO15523 660 aaKnown RBP10.57□□□□□ -0.72
SMG1-205ENST00000561947 MAFO75444 373 aaPredicted RBP10.57□□□□□ -0.72
SMG1-205ENST00000561947 HEXIM1O94992 359 aaKnown RBP10.57□□□□□ -0.72
SMG1-205ENST00000561947 CYP11B1P15538 503 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 PDE6CP51160 858 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 GPC5P78333 572 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 GCNT1Q02742 428 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 KCNV1Q6PIU1 500 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 FASTKD5Q7L8L6 764 aaKnown RBP10.57□□□□□ -0.72
SMG1-205ENST00000561947 FAM71BQ8TC56 605 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 ZNF516Q92618 1163 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 TATDN2Q93075 761 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 CCDC102AQ96A19 550 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 FAM81BQ96LP2 452 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 FNBP1Q96RU3 617 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 MMP19Q99542 508 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 HAPLN2Q9GZV7 340 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 MED4Q9NPJ6 270 aa10.57□□□□□ -0.72
SMG1-205ENST00000561947 DNAJC25-GNG10A0A024R161 153 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 FAM170AA1A519 330 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 ARIH2O95376 493 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 GLI1P08151 1106 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 MMEP08473 750 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 EPHX2P34913 555 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 CDR2Q01850 454 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 CAPSQ13938 189 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 Q3C1V9 767 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 ZACNQ401N2 412 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 HSP90B2PQ58FF3 399 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 C11orf63Q6NUN7 778 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 EMBQ6PCB8 327 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 CRELD2Q6UXH1 353 aaPredicted RBP10.56□□□□□ -0.72
SMG1-205ENST00000561947 SND1Q7KZF4 910 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMG1-205ENST00000561947 AZI2Q9H6S1 392 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 ACP6Q9NPH0 428 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 C1orf112Q9NSG2 853 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 CTTNBP2NLQ9P2B4 639 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 DIS3Q9Y2L1 958 aaKnown RBP10.56□□□□□ -0.72
SMG1-205ENST00000561947 CCDC188H7C350 402 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 RAD51CO43502 376 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 ADCY3O60266 1144 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 LGR5O75473 907 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 LDHAP00338 332 aaKnown RBP10.56□□□□□ -0.72
SMG1-205ENST00000561947 C4BPAP04003 597 aaKnown RBP10.56□□□□□ -0.72
SMG1-205ENST00000561947 ACOT2P49753 483 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 WNT7BP56706 349 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 KCTD2Q14681 263 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 GPAT2Q6NUI2 795 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 DPY19L2Q6NUT2 758 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 ARMC9Q7Z3E5 817 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 KLHL7Q8IXQ5 586 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 DHX38Q92620 1227 aaKnown RBP10.56□□□□□ -0.72
SMG1-205ENST00000561947 CAVIN3Q969G5 261 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 ZBTB45Q96K62 511 aaPredicted RBP10.56□□□□□ -0.72
SMG1-205ENST00000561947 FAM84AQ96KN4 292 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 GPR20Q99678 358 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 SYT17Q9BSW7 474 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 PI4K2AQ9BTU6 479 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 MSTO1Q9BUK6 570 aa10.56□□□□□ -0.72
SMG1-205ENST00000561947 TARS2Q9BW92 718 aaKnown RBP10.56□□□□□ -0.72
SMG1-205ENST00000561947 TTC7AQ9ULT0 858 aaPredicted RBP10.56□□□□□ -0.72
SMG1-205ENST00000561947 A0A0B4J269 797 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 MTA2O94776 668 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 EDN1P05305 212 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 TNNI1P19237 187 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 GUCY2DQ02846 1103 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 CELF3Q5SZQ8 465 aaKnown RBP10.55□□□□□ -0.72
SMG1-205ENST00000561947 LMBRD2Q68DH5 695 aaPredicted RBP10.55□□□□□ -0.72
SMG1-205ENST00000561947 ZNF771Q7L3S4 317 aaPredicted RBP10.55□□□□□ -0.72
SMG1-205ENST00000561947 BBXQ8WY36 941 aaPredicted RBP10.55□□□□□ -0.72
SMG1-205ENST00000561947 DDX1Q92499 740 aaKnown RBP10.55□□□□□ -0.72
SMG1-205ENST00000561947 ELMO3Q96BJ8 720 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 EPB41L5Q9HCM4 733 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 RBAKQ9NYW8 714 aaPredicted RBP10.55□□□□□ -0.72
SMG1-205ENST00000561947 ANKFY1Q9P2R3 1169 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 ADGRA2Q96PE1 1338 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 KRIT1O00522 736 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 HLA-DRAP01903 254 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 KRT5P13647 590 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 PAK2Q13177 524 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 NNTQ13423 1086 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 DRP2Q13474 957 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 WDR44Q5JSH3 913 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 DCAF12L1Q5VU92 463 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 TDRD10Q5VZ19 366 aaKnown RBP10.55□□□□□ -0.72
SMG1-205ENST00000561947 GLG1Q92896 1179 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 ZBTB9Q96C00 473 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 AP1M1Q9BXS5 423 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 MROH8Q9H579 483 aa10.55□□□□□ -0.72
SMG1-205ENST00000561947 PTPRJQ12913 1337 aa10.54□□□□□ -0.72
SMG1-205ENST00000561947 ZSCAN5CA6NGD5 496 aaPredicted RBP10.54□□□□□ -0.72
SMG1-205ENST00000561947 NOP56O00567 594 aaKnown RBP10.54□□□□□ -0.72
SMG1-205ENST00000561947 GAS2O43903 313 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms