RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 DNAJC25Q9H1X3 360 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
SPG7-204ENST00000561911 GOLGA8IPA6NC78 632 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 GOLGA8JA6NMD2 632 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 MEIS3P2A8K0S8 358 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 EXOC3O60645 756 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 RECQL4O94761 1208 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 UPP2O95045 317 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 LDHAP00338 332 aaKnown RBP17.12■□□□□ 0.33
SPG7-204ENST00000561911 NR2F2P24468 414 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 AKAP5P24588 427 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 RPL13P26373 211 aaKnown RBP17.12■□□□□ 0.33
SPG7-204ENST00000561911 TNFSF9P41273 254 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 ACOT2P49753 483 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 HSP90AA2PQ14568 343 aaPredicted RBP17.12■□□□□ 0.33
SPG7-204ENST00000561911 AGMOQ6ZNB7 445 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 TMEM192Q8IY95 271 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 NOC3LQ8WTT2 800 aaKnown RBP17.12■□□□□ 0.33
SPG7-204ENST00000561911 TOP1MTQ969P6 601 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 FBXL18Q96ME1 805 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 ACAP3Q96P50 834 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 MED15Q96RN5 788 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 SLC9A7Q96T83 725 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 DUSP9Q99956 384 aaKnown RBP17.12■□□□□ 0.33
SPG7-204ENST00000561911 FAM213AQ9BRX8 229 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 KIAA1586Q9HCI6 787 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 UBN1Q9NPG3 1134 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 PARP2Q9UGN5 583 aa17.12■□□□□ 0.33
SPG7-204ENST00000561911 CPSF3Q9UKF6 684 aaKnown RBP17.12■□□□□ 0.33
SPG7-204ENST00000561911 HOXA2O43364 376 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 FGFR1P11362 822 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 ATP2A2P16615 1042 aaKnown RBP17.11■□□□□ 0.33
SPG7-204ENST00000561911 YARSP54577 528 aaKnown RBP17.11■□□□□ 0.33
SPG7-204ENST00000561911 FKBP3Q00688 224 aaKnown RBP17.11■□□□□ 0.33
SPG7-204ENST00000561911 ADAM9Q13443 819 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 ENOX2Q16206 610 aaKnown RBP17.11■□□□□ 0.33
SPG7-204ENST00000561911 ANO6Q4KMQ2 910 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 CRELD2Q6UXH1 353 aaPredicted RBP17.11■□□□□ 0.33
SPG7-204ENST00000561911 LRRC55Q6ZSA7 311 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 TMCO2Q7Z6W1 182 aaPredicted RBP17.11■□□□□ 0.33
SPG7-204ENST00000561911 CBWD2Q8IUF1 395 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 ZC3H3Q8IXZ2 948 aaKnown RBP17.11■□□□□ 0.33
SPG7-204ENST00000561911 PHOSPHO2Q8TCD6 241 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 RSAD1Q9HA92 442 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 TOPORSQ9NS56 1045 aaPredicted RBP17.11■□□□□ 0.33
SPG7-204ENST00000561911 RNF19AQ9NV58 838 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 GIT1Q9Y2X7 761 aa17.11■□□□□ 0.33
SPG7-204ENST00000561911 CETN3O15182 167 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 CXCL8P10145 99 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 POU5F1Q01860 360 aaKnown RBP17.1■□□□□ 0.33
SPG7-204ENST00000561911 SNRNP35Q16560 246 aaKnown RBP17.1■□□□□ 0.33
SPG7-204ENST00000561911 CLLU1OSQ5K130 101 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 FAM117BQ6P1L5 589 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 GLB1LQ6UWU2 654 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 CHRDL2Q6WN34 429 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 BRSK2Q8IWQ3 736 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 CSGALNACT2Q8N6G5 542 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 SNX27Q96L92 541 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
SPG7-204ENST00000561911 PRO3102Q9H379 93 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 RPF1Q9H9Y2 349 aaKnown RBP17.1■□□□□ 0.33
SPG7-204ENST00000561911 KLK14Q9P0G3 267 aa17.1■□□□□ 0.33
SPG7-204ENST00000561911 ZNF233A6NK53 670 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 MEFVO15553 781 aaPredicted RBP17.09■□□□□ 0.33
SPG7-204ENST00000561911 OFD1O75665 1012 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 DGKIO75912 1065 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 GJB5O95377 273 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 ADRB2P07550 413 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 MLH1P40692 756 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 CASP4P49662 377 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 GATMP50440 423 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 SLC10A6Q3KNW5 377 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 HELQQ8TDG4 1101 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 EEF2KMTQ96G04 330 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 ZFP42Q96MM3 310 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 CEP63Q96MT8 703 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 GAD1Q99259 594 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 TMEM117Q9H0C3 514 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 RBAKQ9NYW8 714 aaPredicted RBP17.09■□□□□ 0.33
SPG7-204ENST00000561911 FRMD4BQ9Y2L6 1034 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 MICAL3Q7RTP6 2002 aa17.09■□□□□ 0.33
SPG7-204ENST00000561911 TNRC18O15417 2968 aaPredicted RBP17.09■□□□□ 0.33
SPG7-204ENST00000561911 TTC26A0AVF1 554 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 ARL5CA6NH57 179 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 INPPL1O15357 1258 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 SLC16A3O15427 465 aaKnown RBP17.08■□□□□ 0.32
SPG7-204ENST00000561911 AKAP3O75969 853 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 PPP2R3AQ06190 1150 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 XKR4Q5GH76 650 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 LRSAM1Q6UWE0 723 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 CD302Q8IX05 232 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 TDHQ8IZJ6 230 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 ABI1Q8IZP0 508 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 RDH13Q8NBN7 331 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 ENOX1Q8TC92 643 aaKnown RBP17.08■□□□□ 0.32
SPG7-204ENST00000561911 RSPH1Q8WYR4 309 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 RPS6KC1Q96S38 1066 aa17.08■□□□□ 0.32
SPG7-204ENST00000561911 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms