RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 ANKRD1Q15327 319 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 NAB2Q15742 525 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 USP41Q3LFD5 358 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 PHLDB3Q6NSJ2 640 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 FUT10Q6P4F1 479 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 POTEGQ6S5H5 508 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 TPH2Q8IWU9 490 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 HACE1Q8IYU2 909 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 DTWD2Q8NBA8 298 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 CPB2Q96IY4 423 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 MYADMQ96S97 322 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 COLEC11Q9BWP8 271 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 GPR62Q9BZJ7 368 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 PRKD2Q9BZL6 878 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 NT5C3AQ9H0P0 336 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 MFSD1Q9H3U5 465 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 FZD8Q9H461 694 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 SLC2A4RGQ9NR83 387 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 BMP2KQ9NSY1 1161 aaPredicted RBP9.32□□□□□ -0.92
PALB2-202ENST00000561514 ADAM28Q9UKQ2 775 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 PCDHA12Q9UN75 941 aa9.32□□□□□ -0.92
PALB2-202ENST00000561514 KRBA1A5PL33 1030 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 TGM5O43548 720 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 PI15O43692 258 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 NARSO43776 548 aaKnown RBP9.31□□□□□ -0.92
PALB2-202ENST00000561514 NR1I2O75469 434 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 SRFP11831 508 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 HOXA9P31269 272 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 HTR4Q13639 388 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 FRMD5Q7Z6J6 570 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 SIX5Q8N196 739 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 SLC44A3Q8N4M1 653 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 NSUN7Q8NE18 718 aaKnown RBP9.31□□□□□ -0.92
PALB2-202ENST00000561514 FLCNQ8NFG4 579 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 PIK3R5Q8WYR1 880 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 SMG7Q92540 1137 aaKnown RBP9.31□□□□□ -0.92
PALB2-202ENST00000561514 GTF3C6Q969F1 213 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 NKD2Q969F2 451 aaPredicted RBP9.31□□□□□ -0.92
PALB2-202ENST00000561514 POLR3FQ9H1D9 316 aaPredicted RBP9.31□□□□□ -0.92
PALB2-202ENST00000561514 BRMS1Q9HCU9 246 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.31□□□□□ -0.92
PALB2-202ENST00000561514 DLGAP2Q9P1A6 1054 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 FBXW11Q9UKB1 542 aa9.31□□□□□ -0.92
PALB2-202ENST00000561514 ZFP37Q9Y6Q3 630 aaPredicted RBP9.31□□□□□ -0.92
PALB2-202ENST00000561514 SF3B1O75533 1304 aaKnown RBP eCLIP9.31□□□□□ -0.92
PALB2-202ENST00000561514 TMEM189-UBE2V1I3L0A0 370 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 C2CD2LO14523 706 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 PTGESO14684 152 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 NEMFO60524 1076 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 ZMYND10O75800 440 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 LARGE1O95461 756 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 HNRNPA1P09651 372 aaKnown RBP eCLIP9.3□□□□□ -0.92
PALB2-202ENST00000561514 LAMP2P13473 410 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 ORC2Q13416 577 aaPredicted RBP9.3□□□□□ -0.92
PALB2-202ENST00000561514 TUSC3Q13454 348 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 ANGPT1Q15389 498 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 CALCRLQ16602 461 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 ME3Q16798 604 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 RTP2Q5QGT7 225 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 RTL10Q7L3V2 364 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 DIS3L2Q8IYB7 885 aaKnown RBP9.3□□□□□ -0.92
PALB2-202ENST00000561514 MCPH1Q8NEM0 835 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 POLR3CQ9BUI4 534 aaPredicted RBP9.3□□□□□ -0.92
PALB2-202ENST00000561514 CCDC113Q9H0I3 377 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 SEMA4AQ9H3S1 761 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 PDZD7Q9H5P4 517 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 TTC12Q9H892 705 aaPredicted RBP9.3□□□□□ -0.92
PALB2-202ENST00000561514 TUFT1Q9NNX1 390 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 PRMT7Q9NVM4 692 aaPredicted RBP9.3□□□□□ -0.92
PALB2-202ENST00000561514 FBXL21Q9UKT6 434 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 DCHS1Q96JQ0 3298 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 MYO10Q9HD67 2058 aa9.3□□□□□ -0.92
PALB2-202ENST00000561514 POTEMA6NI47 508 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 TTLL13PA6NNM8 815 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 BTBD18B2RXH4 712 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 MARCH6O60337 910 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 USO1O60763 962 aaKnown RBP9.29□□□□□ -0.92
PALB2-202ENST00000561514 KIF4AO95239 1232 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 NPTXRO95502 500 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 MUTP22033 750 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 AKAP5P24588 427 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 GBP2P32456 591 aaPredicted RBP9.29□□□□□ -0.92
PALB2-202ENST00000561514 RBM25P49756 843 aaKnown RBP9.29□□□□□ -0.92
PALB2-202ENST00000561514 ST3GAL1Q11201 340 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 CATSPER3Q86XQ3 398 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 LNX1Q8TBB1 728 aaPredicted RBP9.29□□□□□ -0.92
PALB2-202ENST00000561514 PIGOQ8TEQ8 1089 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 RSAD2Q8WXG1 361 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 RIN2Q8WYP3 895 aaPredicted RBP9.29□□□□□ -0.92
PALB2-202ENST00000561514 B3GALT6Q96L58 329 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 ARID3AQ99856 593 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 CLSTN3Q9BQT9 956 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 PAAF1Q9BRP4 392 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 TTPALQ9BTX7 342 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 DDX23Q9BUQ8 820 aaKnown RBP9.29□□□□□ -0.92
PALB2-202ENST00000561514 TRIM6Q9C030 488 aaPredicted RBP9.29□□□□□ -0.92
PALB2-202ENST00000561514 TMEM60Q9H2L4 133 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 TBC1D17Q9HA65 648 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 GPRC5CQ9NQ84 441 aa9.29□□□□□ -0.92
PALB2-202ENST00000561514 ARHGEF3Q9NR81 526 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms