RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 EFEMP2O95967 443 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 TMEM119Q4V9L6 283 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 CES5AQ6NT32 575 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 BRAPQ7Z569 592 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 CABP7Q86V35 215 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 COLEC11Q9BWP8 271 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 EMILIN2Q9BXX0 1053 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 NT5C3AQ9H0P0 336 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 POMKQ9H5K3 350 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 ARHGAP28Q9P2N2 729 aa18.93■□□□□ 0.62
CDC42BPB-208ENST00000561271 K7ERI5 159 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 KLRC2P26717 231 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 GRIN1Q05586 938 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 ITIH3Q06033 890 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 TUSC3Q13454 348 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 HERC4Q5GLZ8 1057 aaPredicted RBP18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 FUT10Q6P4F1 479 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 TAS1R3Q7RTX0 852 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 PPFIBP1Q86W92 1011 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 HASPINQ8TF76 798 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 GPR62Q9BZJ7 368 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 ADAM7Q9H2U9 754 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 KMT5AQ9NQR1 393 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 ADAM28Q9UKQ2 775 aa18.92■□□□□ 0.62
CDC42BPB-208ENST00000561271 SPDYE4A6NLX3 237 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 SFI1A8K8P3 1242 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 SLC16A4O15374 487 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 KIF4AO95239 1232 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 PLA2G4BP0C869 781 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 GUCY2CP25092 1073 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 CLCN4P51793 760 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 SLC12A3P55017 1021 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 HSP90AA2PQ14568 343 aaPredicted RBP18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 SF3A1Q15459 793 aaKnown RBP18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 ZNF568Q3ZCX4 644 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 GLRA4Q5JXX5 417 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 CEP120Q8N960 986 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 SYT2Q8N9I0 419 aaPredicted RBP18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 LRRC15Q8TF66 581 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 FBXL18Q96ME1 805 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 CDT1Q9H211 546 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 TSHZ2Q9NRE2 1034 aa18.91■□□□□ 0.62
CDC42BPB-208ENST00000561271 TSC2P49815 1807 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 NOTCH4Q99466 2003 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 NPHP3-ACAD11A0A0J9YXS1 232 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 PRR33A8MZF0 331 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 TEX28O15482 410 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 DSG1Q02413 1049 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 NAB2Q15742 525 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 KIAA0319Q5VV43 1072 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 KIAA1841Q6NSI8 718 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 TMC5Q6UXY8 1006 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 AK8Q96MA6 479 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 NECTIN4Q96NY8 510 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 ACO2Q99798 780 aaKnown RBP18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 TIPINQ9BVW5 301 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 TARS2Q9BW92 718 aaKnown RBP18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 MRPL4Q9BYD3 311 aaKnown RBP18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 TMEM134Q9H6X4 195 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 SFXN1Q9H9B4 322 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 MAN1C1Q9NR34 630 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 FOXD4L1Q9NU39 408 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 TNFSF13BQ9Y275 285 aa18.9■□□□□ 0.62
CDC42BPB-208ENST00000561271 BMP15O95972 392 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 THP07101 528 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 ADH1AP07327 375 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 PDCP20941 246 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 UBA7P41226 1012 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 MTHFRP42898 656 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 OSTNP61366 133 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 APBB1IPQ7Z5R6 666 aaPredicted RBP18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 ZBTB33Q86T24 672 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 GLYCTKQ8IVS8 523 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 RIPOR3Q96MK2 946 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 C17orf75Q9HAS0 396 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 CHST7Q9NS84 486 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 SSX2IPQ9Y2D8 614 aa18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 SF3B1O75533 1304 aaKnown RBP eCLIP18.89■□□□□ 0.61
CDC42BPB-208ENST00000561271 TADA2AO75478 443 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 MYBP10242 640 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 HARSP12081 509 aaKnown RBP18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 PLS3P13797 630 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 RESTQ13127 1097 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 DHX8Q14562 1220 aaKnown RBP18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 KARSQ15046 597 aaKnown RBP18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 USP41Q3LFD5 358 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 GPBP1Q86WP2 473 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 KCTD17Q8N5Z5 321 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 RASSF8Q8NHQ8 419 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 RIN2Q8WYP3 895 aaPredicted RBP18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 CALML4Q96GE6 196 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 RXFP1Q9HBX9 757 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 PTPRHQ9HD43 1115 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 HCN4Q9Y3Q4 1203 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 CLIC4Q9Y696 253 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 SCN1AP35498 2009 aa18.88■□□□□ 0.61
CDC42BPB-208ENST00000561271 C2CD4DB7Z1M9 353 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 ABLIM1O14639 778 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 GLUD1P00367 558 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms