RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 NR1I3Q14994 352 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 TRIM71Q2Q1W2 868 aaKnown RBP8.8□□□□□ -1
CPNE6-218ENST00000560845 FAM117BQ6P1L5 589 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 TRAF7Q6Q0C0 670 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 FILIP1Q7Z7B0 1213 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 LRRC71Q8N4P6 559 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 C7orf31Q8N865 590 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 CCDC150Q8NCX0 1101 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.8□□□□□ -1
CPNE6-218ENST00000560845 PSPC1Q8WXF1 523 aaKnown RBP8.8□□□□□ -1
CPNE6-218ENST00000560845 TSC1Q92574 1164 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 NTPCRQ9BSD7 190 aaKnown RBP8.8□□□□□ -1
CPNE6-218ENST00000560845 KATNAL1Q9BW62 490 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 IKZF4Q9H2S9 585 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 RNPEPQ9H4A4 650 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 TUT1Q9H6E5 874 aaKnown RBP8.8□□□□□ -1
CPNE6-218ENST00000560845 HDAC6Q9UBN7 1215 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 TBX20Q9UMR3 447 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 PTPRSQ13332 1948 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 WDR81Q562E7 1941 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 ITIH6Q6UXX5 1313 aa8.8□□□□□ -1
CPNE6-218ENST00000560845 RBAK-RBAKDNI3L0D1 243 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 RIOK3O14730 519 aaKnown RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 CLIC2O15247 247 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 MAGEB2O15479 319 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 TEX33O43247 280 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 SKILP12757 684 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 IL9P15248 144 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 PBX1P40424 430 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 DNM2P50570 870 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 CYP2J2P51589 502 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 CLCN3P51790 818 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 SNRPFP62306 86 aaKnown RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 UBXN1Q04323 297 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 STRN3Q13033 797 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 TBX2Q13207 712 aaPredicted RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 DRP2Q13474 957 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 TFDP1Q14186 410 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 MYBPC2Q14324 1141 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 MXD4Q14582 209 aaPredicted RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 MBTPS1Q14703 1052 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 MFSD10Q14728 455 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 GRIK4Q16099 956 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 PTPN21Q16825 1174 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 KIAA0753Q2KHM9 967 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 VWA3BQ502W6 1294 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 FKBP15Q5T1M5 1219 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 ZNF618Q5T7W0 954 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 CEP135Q66GS9 1140 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 E4F1Q66K89 784 aaPredicted RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 SPECC1LQ69YQ0 1117 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 PTCRAQ6ISU1 281 aaPredicted RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.79□□□□□ -1
CPNE6-218ENST00000560845 TMEM139Q8IV31 216 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 SLC9A9Q8IVB4 645 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 TRIM59Q8IWR1 403 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 ZBTB8OSQ8IWT0 167 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 C12orf56Q8IXR9 622 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 CCAR2Q8N163 923 aaKnown RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 METTL13Q8N6R0 699 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 FBXO22Q8NEZ5 403 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 PRPF31Q8WWY3 499 aaKnown RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 KCNN1Q92952 543 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 WNT8BQ93098 351 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 BICD1Q96G01 975 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 C17orf80Q9BSJ5 609 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 MKNK1Q9BUB5 465 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 C2orf40Q9H1Z8 148 aa8.79□□□□□ -1
CPNE6-218ENST00000560845 METTL14Q9HCE5 456 aaKnown RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 SUCLA2Q9P2R7 463 aaPredicted RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 ARMCX3Q9UH62 379 aaPredicted RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 MYH9P35579 1960 aaKnown RBP8.79□□□□□ -1
CPNE6-218ENST00000560845 A0A1W2PQC6 194 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 GRXCR2A6NFK2 248 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 RRN3P2A6NIE6 340 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 TISP43B9A030 160 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 HAS3O00219 553 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 HNRNPDLO14979 420 aaKnown RBP8.78□□□□□ -1
CPNE6-218ENST00000560845 CTIFO43310 598 aaKnown RBP8.78□□□□□ -1
CPNE6-218ENST00000560845 EXOC3O60645 756 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 AKAP3O75969 853 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 AMHP03971 560 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 SMIM10L2AP0DMW4 78 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 SMIM10L2BP0DMW5 78 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 ALADP13716 330 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 PSMC2P35998 433 aaKnown RBP8.78□□□□□ -1
CPNE6-218ENST00000560845 LIG4P49917 911 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 EFNA5P52803 228 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 ZNF200P98182 395 aaPredicted RBP8.78□□□□□ -1
CPNE6-218ENST00000560845 PPP2R3AQ06190 1150 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 LAMTOR4Q0VGL1 99 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 MKRN4PQ13434 485 aaPredicted RBP8.78□□□□□ -1
CPNE6-218ENST00000560845 TRIM14Q14142 442 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 PTPROQ16827 1216 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 PUS10Q3MIT2 529 aaKnown RBP8.78□□□□□ -1
CPNE6-218ENST00000560845 TIGD5Q53EQ6 642 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 MIIPQ5JXC2 388 aa8.78□□□□□ -1
CPNE6-218ENST00000560845 DNTTIP2Q5QJE6 756 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms