RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 DDX3XO00571 662 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNX1-211ENST00000560829 TNPO2O14787 897 aaKnown RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 OGTO15294 1046 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 F2P00734 622 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 GJB1P08034 283 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 PHKA2P46019 1235 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 MFAP3P55082 362 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 WNT7BP56706 349 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 PPFIA1Q13136 1202 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 ENOX2Q16206 610 aaKnown RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 CCL14Q16627 93 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 ARHGAP44Q17R89 818 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 PRAMEF19Q5SWL8 479 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 MARCH8Q5T0T0 291 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 SHC3Q92529 594 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 ZBTB10Q96DT7 871 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 NT5C1BQ96P26 610 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 GPBP1L1Q9HC44 474 aaPredicted RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 PDE11AQ9HCR9 933 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 PRMT7Q9NVM4 692 aaPredicted RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 ABT1Q9ULW3 272 aaKnown RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 MACROD2A1Z1Q3 448 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 RRN3P2A6NIE6 340 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 INO80B-WBP1J3KQ70 363 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 DYNC1LI2O43237 492 aaPredicted RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 TACC1O75410 805 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 CYP2B6P20813 491 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 CYP2C19P33261 490 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 MATR3P43243 847 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNX1-211ENST00000560829 AP3M2P53677 418 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 GCNT1Q02742 428 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 PRPF4BQ13523 1007 aaKnown RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 GRIK4Q16099 956 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 ZBTB41Q5SVQ8 909 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 PAPD7Q5XG87 772 aaKnown RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 ALKBH5Q6P6C2 394 aaKnown RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 MPZL3Q6UWV2 235 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 ENOSF1Q7L5Y1 443 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 FAM71AQ8IYT1 594 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 KREMEN1Q96MU8 473 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 INO80BQ9C086 356 aaPredicted RBP13.95□□□□□ -0.18
SNX1-211ENST00000560829 INTUQ9ULD6 942 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 TNFSF13BQ9Y275 285 aa13.95□□□□□ -0.18
SNX1-211ENST00000560829 TNNI1P19237 187 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 KIAA0753Q2KHM9 967 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 ATF7IP2Q5U623 682 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 TRAPPC11Q7Z392 1133 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 TLK2Q86UE8 772 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 LNX1Q8TBB1 728 aaPredicted RBP13.94□□□□□ -0.18
SNX1-211ENST00000560829 CARD6Q9BX69 1037 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 MINDY3Q9H8M7 445 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 SALL4Q9UJQ4 1053 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 CPSF3Q9UKF6 684 aaKnown RBP13.94□□□□□ -0.18
SNX1-211ENST00000560829 CAPN6Q9Y6Q1 641 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 PTPRJQ12913 1337 aa13.94□□□□□ -0.18
SNX1-211ENST00000560829 ALDH1A1P00352 501 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 CTGFP29279 349 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 POU5F1Q01860 360 aaKnown RBP13.93□□□□□ -0.18
SNX1-211ENST00000560829 NCBP1Q09161 790 aaKnown RBP13.93□□□□□ -0.18
SNX1-211ENST00000560829 SURF1Q15526 300 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 AMHR2Q16671 573 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 TDRD10Q5VZ19 366 aaKnown RBP13.93□□□□□ -0.18
SNX1-211ENST00000560829 TSC1Q92574 1164 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 KAT2BQ92831 832 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 KAT5Q92993 513 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 ZIC5Q96T25 663 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 TCHPQ9BT92 498 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 JRKLQ9Y4A0 524 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 A0A087WZ62 844 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 EFCAB8A8MWE9 144 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 HAS3O00219 553 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 B4GALT5O43286 388 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 TADA3O75528 432 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 MOCS3O95396 460 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 HLA-DRAP01903 254 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 IQCF3P0C7M6 154 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 CPT1AP50416 773 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 WHAMMP3Q1A5X7 153 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 ZBTB33Q86T24 672 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 ZNF410Q86VK4 478 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 WDR49Q8IV35 697 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 KIAA0319LQ8IZA0 1049 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 MNS1Q8NEH6 495 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 MAP7D2Q96T17 732 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 FDXACB1Q9BRP7 624 aaPredicted RBP13.93□□□□□ -0.18
SNX1-211ENST00000560829 PACSIN1Q9BY11 444 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 AKT3Q9Y243 479 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 PCDHGC5Q9Y5F6 944 aa13.93□□□□□ -0.18
SNX1-211ENST00000560829 NRCAMQ92823 1304 aa13.92□□□□□ -0.18
SNX1-211ENST00000560829 A0A0A6YYK5 440 aaPredicted RBP13.92□□□□□ -0.18
SNX1-211ENST00000560829 MBLAC1A4D2B0 266 aaPredicted RBP13.92□□□□□ -0.18
SNX1-211ENST00000560829 ZEB2O60315 1214 aa13.92□□□□□ -0.18
SNX1-211ENST00000560829 ECM2O94769 699 aaPredicted RBP13.92□□□□□ -0.18
SNX1-211ENST00000560829 VNN1O95497 513 aa13.92□□□□□ -0.18
SNX1-211ENST00000560829 ATP1A1P05023 1023 aaKnown RBP13.92□□□□□ -0.18
SNX1-211ENST00000560829 TNFSF9P41273 254 aa13.92□□□□□ -0.18
SNX1-211ENST00000560829 FCGRTP55899 365 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms