RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 CNOT1A5YKK6 2376 aaKnown RBP11.06□□□□□ -0.64
TPM1-225ENST00000560679 PRPF3O43395 683 aaKnown RBP11.06□□□□□ -0.64
TPM1-225ENST00000560679 HNRNPA1P09651 372 aaKnown RBP eCLIP11.06□□□□□ -0.64
TPM1-225ENST00000560679 PSMC5P62195 406 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 CREMQ03060 361 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 NOTUMQ6P988 496 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 DHX32Q7L7V1 743 aaKnown RBP11.06□□□□□ -0.64
TPM1-225ENST00000560679 RASEFQ8IZ41 740 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 RNF149Q8NC42 400 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 TBCKQ8TEA7 893 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 SLC7A3Q8WY07 619 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 ING5Q8WYH8 240 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 JPH2Q9BR39 696 aaPredicted RBP11.06□□□□□ -0.64
TPM1-225ENST00000560679 COLEC11Q9BWP8 271 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 APOL6Q9BWW8 343 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 BACH2Q9BYV9 841 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 PLA2G2FQ9BZM2 168 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 GIT1Q9Y2X7 761 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 ZFYVE26Q68DK2 2539 aa11.06□□□□□ -0.64
TPM1-225ENST00000560679 F5P12259 2224 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 CYP3A7-CYP3A51PA0A087WV96 503 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.05□□□□□ -0.64
TPM1-225ENST00000560679 NRG2O14511 850 aaPredicted RBP11.05□□□□□ -0.64
TPM1-225ENST00000560679 SLC37A4O43826 429 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 GDF9O60383 454 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 KIF4AO95239 1232 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 POU2F2P09086 479 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 CYP3A7P24462 503 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 AKAP5P24588 427 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 GRIK3Q13003 919 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 NTRK3Q16288 839 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 SLC5A9Q2M3M2 681 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 PPM1LQ5SGD2 360 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 LIN9Q5TKA1 542 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 LAIR1Q6GTX8 287 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 ZNF852Q6ZMS4 543 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 FERMT3Q86UX7 667 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
TPM1-225ENST00000560679 SLC7A14Q8TBB6 771 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 BICD2Q8TD16 824 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 HASPINQ8TF76 798 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 PIK3R5Q8WYR1 880 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 CCDC51Q96ER9 411 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 FAM126AQ9BYI3 521 aaPredicted RBP11.05□□□□□ -0.64
TPM1-225ENST00000560679 CSRNP2Q9H175 543 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 CHRDQ9H2X0 955 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 VAV3Q9UKW4 847 aa11.05□□□□□ -0.64
TPM1-225ENST00000560679 NAP1L2Q9ULW6 460 aaPredicted RBP11.05□□□□□ -0.64
TPM1-225ENST00000560679 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM1-225ENST00000560679 ZMYM2Q9UBW7 1377 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 TICRRQ7Z2Z1 1910 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 NR1I2O75469 434 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 ECI2O75521 394 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 ERLIN2O94905 339 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 CPA1P15085 419 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 FCARP24071 287 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 PMLP29590 882 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 AXLP30530 894 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 MBTD1Q05BQ5 628 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 ADCY1Q08828 1119 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 HSP90AA2PQ14568 343 aaPredicted RBP11.04□□□□□ -0.64
TPM1-225ENST00000560679 EMC2Q15006 297 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 PSMD5Q16401 504 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 PABPC1LQ4VXU2 614 aaKnown RBP11.04□□□□□ -0.64
TPM1-225ENST00000560679 PRR23CQ6ZRP0 262 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 CEP170P1Q96L14 293 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 TTPALQ9BTX7 342 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 XPNPEP1Q9NQW7 623 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 SEMA4GQ9NTN9 838 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 KLK14Q9P0G3 267 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 DNMT3BQ9UBC3 853 aaKnown RBP11.04□□□□□ -0.64
TPM1-225ENST00000560679 KCNH3Q9ULD8 1083 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 POLIQ9UNA4 740 aa11.04□□□□□ -0.64
TPM1-225ENST00000560679 LAMA1P25391 3075 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 CCDC196A0A1B0GTZ2 297 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 M0R2N6 131 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 NCAM2O15394 837 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 B4GALT5O43286 388 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 LRP3O75074 770 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 XYLBO75191 536 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 TADA2AO75478 443 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 RETP07949 1114 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 CEBPBP17676 345 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 ARF4P18085 180 aaPredicted RBP11.03□□□□□ -0.64
TPM1-225ENST00000560679 ANP32AP39687 249 aaKnown RBP11.03□□□□□ -0.64
TPM1-225ENST00000560679 RFC5P40937 340 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 QARSP47897 775 aaKnown RBP11.03□□□□□ -0.64
TPM1-225ENST00000560679 PTENP60484 403 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 DMWDQ09019 674 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 PPP2R5CQ13362 524 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 NPY5RQ15761 445 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 TSGA10IPQ3SY00 556 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 TANGO2Q6ICL3 276 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 CDR2LQ86X02 465 aaPredicted RBP11.03□□□□□ -0.64
TPM1-225ENST00000560679 IFNLR1Q8IU57 520 aaPredicted RBP11.03□□□□□ -0.64
TPM1-225ENST00000560679 ASAP3Q8TDY4 903 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 CHAMP1Q96JM3 812 aa11.03□□□□□ -0.64
TPM1-225ENST00000560679 NELL2Q99435 816 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms