RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 RABGGTAQ92696 567 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 NECAB3Q96P71 396 aaPredicted RBP14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 CDCA3Q99618 268 aaPredicted RBP14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 CCDC94Q9BW85 323 aaPredicted RBP14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 COLEC11Q9BWP8 271 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 CFAP45Q9UL16 551 aa14.23□□□□□ -0.13
CTDSPL2-209ENST00000560620 CASTOR2A6NHX0 329 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 C2CD2LO14523 706 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 INPPL1O15357 1258 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 TRAK2O60296 914 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 PPP6R2O75170 966 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 TBX10O75333 385 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 MAPTP10636 758 aaKnown RBP14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 LTBRP36941 435 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 ME1P48163 572 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 DUSP6Q16828 381 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 CTC1Q2NKJ3 1217 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 KIAA1841Q6NSI8 718 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 MPZL3Q6UWV2 235 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 FAM178BQ8IXR5 827 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 MRPL43Q8N983 215 aaKnown RBP14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 CDT1Q9H211 546 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 TOPORSQ9NS56 1045 aaPredicted RBP14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 STK39Q9UEW8 545 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 CD207Q9UJ71 328 aa14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 BARX2Q9UMQ3 279 aaPredicted RBP14.22□□□□□ -0.13
CTDSPL2-209ENST00000560620 C2orf71A6NGG8 1288 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 HNRNPDLO14979 420 aaKnown RBP14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 CLDN3O15551 220 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 CUTAO60888 179 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 TADA2AO75478 443 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 TOM1L1O75674 476 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 URODP06132 367 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 MCF2P10911 925 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 IDEP14735 1019 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 IL9P15248 144 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 LIG4P49917 911 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 NCKAP1LP55160 1127 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 RBM10P98175 930 aaKnown RBP14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 DSC1Q08554 894 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 TUSC3Q13454 348 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 COL19A1Q14993 1142 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 GLRA4Q5JXX5 417 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 CEP120Q8N960 986 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 GSTCDQ8NEC7 633 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 KCNG4Q8TDN1 519 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 DDX12PQ92771 950 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 ZBTB45Q96K62 511 aaPredicted RBP14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 ZBP1Q9H171 429 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 MRPL17Q9NRX2 175 aaKnown RBP14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 CACNG4Q9UBN1 327 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 MORC2Q9Y6X9 1032 aaPredicted RBP14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 BRWD1Q9NSI6 2320 aa14.21□□□□□ -0.13
CTDSPL2-209ENST00000560620 ZMYM2Q9UBW7 1377 aa14.21□□□□□ -0.14
CTDSPL2-209ENST00000560620 GRXCR2A6NFK2 248 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 F8W810 466 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 TNFRSF10AO00220 468 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 GLP2RO95838 553 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 CTSAP10619 480 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 SSTR3P32745 418 aaPredicted RBP14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 GRM5P41594 1212 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 DNM1Q05193 864 aaKnown RBP14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 NOLC1Q14978 699 aaKnown RBP eCLIP14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 SEZ6Q53EL9 994 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 ATL3Q6DD88 541 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 ZPBP2Q6X784 338 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 HASPINQ8TF76 798 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 ACAP3Q96P50 834 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 APOL5Q9BWW9 433 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 EMILIN2Q9BXX0 1053 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 ADAM28Q9UKQ2 775 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 TBX20Q9UMR3 447 aa14.2□□□□□ -0.14
CTDSPL2-209ENST00000560620 A0A087X0B3 334 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 MYMKA6NI61 221 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 TULP1O00294 542 aaPredicted RBP14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 PTGESO14684 152 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 SOD2P04179 222 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 SCP2P22307 547 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 KLRC2P26717 231 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 NMT1P30419 496 aaKnown RBP14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 ABCD1P33897 745 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 GLUD2P49448 558 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 ZNF131P52739 623 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 HSP90AA2PQ14568 343 aaPredicted RBP14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 SFR1Q86XK3 245 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 STAMQ92783 540 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 DHX58Q96C10 678 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 PAAF1Q9BRP4 392 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 VN1R3Q9BXE9 311 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 CXCL16Q9H2A7 254 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 MRPL44Q9H9J2 332 aaKnown RBP14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 PTPRHQ9HD43 1115 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 MARCH5Q9NX47 278 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 FAM13BQ9NYF5 915 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 TBC1D7Q9P0N9 293 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 CLEC1BQ9P126 229 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 SSX2IPQ9Y2D8 614 aa14.19□□□□□ -0.14
CTDSPL2-209ENST00000560620 SPTBN5Q9NRC6 3674 aaKnown RBP14.18□□□□□ -0.14
CTDSPL2-209ENST00000560620 MBTPS2O43462 519 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms