RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 C16orf71Q8IYS4 520 aaPredicted RBP5.28□□□□□ -1.56
TMOD3-207ENST00000560549 ASB15Q8WXK1 588 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 SLC39A13Q96H72 371 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 INCENPQ9NQS7 918 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 HOMER2Q9NSB8 354 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 ARHGAP28Q9P2N2 729 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 ABCA3Q99758 1704 aa5.28□□□□□ -1.56
TMOD3-207ENST00000560549 PTPRCP08575 1304 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 B4E1Z4 1266 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 H0Y858 1186 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 GSTA4O15217 222 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 F2P00734 622 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 ZNF20P17024 532 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 ADCYAP1R1P41586 468 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 HERVK_113P62684 666 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 UBE4AQ14139 1066 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 ICAM4Q14773 271 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 PLEKHO1Q53GL0 409 aaPredicted RBP5.27□□□□□ -1.57
TMOD3-207ENST00000560549 CT47A1Q5JQC4 288 aaPredicted RBP5.27□□□□□ -1.57
TMOD3-207ENST00000560549 KANK2Q63ZY3 851 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 CEP85Q6P2H3 762 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 OTOP1Q7RTM1 612 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 NXPE1Q8N323 547 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 ANKRD44Q8N8A2 993 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 SMC1BQ8NDV3 1235 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 DNERQ8NFT8 737 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 OTUD7AQ8TE49 926 aaPredicted RBP5.27□□□□□ -1.57
TMOD3-207ENST00000560549 WNK4Q96J92 1243 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 MAF1Q9H063 256 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 DCTPP1Q9H773 170 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 BARX1Q9HBU1 254 aaPredicted RBP5.27□□□□□ -1.57
TMOD3-207ENST00000560549 LRRC37A3O60309 1634 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 ATP10DQ9P241 1426 aa5.27□□□□□ -1.57
TMOD3-207ENST00000560549 PRAMEF22A3QJZ6 481 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 ANXA1P04083 346 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 ADCY8P40145 1251 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 STAT4Q14765 748 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 STILQ15468 1287 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 MAP9Q49MG5 647 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 CCDC30Q5VVM6 783 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 SPTY2D1Q68D10 685 aaPredicted RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 SLC4A10Q6U841 1118 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 DDX46Q7L014 1031 aaKnown RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 RALYLQ86SE5 291 aaKnown RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 DDX53Q86TM3 631 aaKnown RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 RAVER1Q8IY67 606 aaKnown RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 AHI1Q8N157 1196 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 GCC1Q96CN9 775 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 C8orf49Q96NF6 230 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 CEP89Q96ST8 783 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 TRIM8Q9BZR9 551 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 CD248Q9HCU0 757 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 KCNH7Q9NS40 1196 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 BABAM1Q9NWV8 329 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 GALNT8Q9NY28 637 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 ST6GALNAC2Q9UJ37 374 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 CRYBG1Q9Y4K1 1723 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 ZNF536O15090 1300 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 SLC12A8A0AV02 714 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 GPR39O43194 453 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 INSRRP14616 1297 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 ATP2A2P16615 1042 aaKnown RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 TNFRSF1AP19438 455 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 EIF2S2P20042 333 aaKnown RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 POLD1P28340 1107 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 PPP2CBP62714 309 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 PPP2CAP67775 309 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 IRF9Q00978 393 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 TBR1Q16650 682 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 PROSER3Q2NL68 480 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 BRDTQ58F21 947 aaPredicted RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 LARP4Q71RC2 724 aaKnown RBP eCLIP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 RTN4RL1Q86UN2 441 aaPredicted RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 KIF18BQ86Y91 864 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 CHST14Q8NCH0 376 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 FOXRED1Q96CU9 486 aaPredicted RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 WWC2-AS2Q96NR7 200 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 GBP4Q96PP9 640 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 GPR20Q99678 358 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 H2AFY2Q9P0M6 372 aaPredicted RBP5.26□□□□□ -1.57
TMOD3-207ENST00000560549 B4GALT6Q9UBX8 382 aa5.26□□□□□ -1.57
TMOD3-207ENST00000560549 PHRF1Q9P1Y6 1649 aaKnown RBP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 GSPT1P15170 499 aaKnown RBP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 SDHAP31040 664 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 FLT3P36888 993 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 GNALP38405 381 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 CCT4P50991 539 aaKnown RBP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 RRADP55042 308 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 CD83Q01151 205 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 NOLC1Q14978 699 aaKnown RBP eCLIP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 TMEM132BQ14DG7 1078 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 CDSNQ15517 529 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 NFE2Q16621 373 aaPredicted RBP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 RNF151Q2KHN1 245 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 AMOTQ4VCS5 1084 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 ARHGEF18Q6ZSZ5 1173 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 UBE2R2Q712K3 238 aaPredicted RBP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 REXO1L1PQ8IX06 675 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 RPAP2Q8IXW5 612 aaPredicted RBP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 BCL6BQ8N143 479 aaPredicted RBP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms