RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 KLRC2P26717 231 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 YWHABP31946 246 aaKnown RBP15.47■□□□□ 0.07
LDLR-213ENST00000560502 MCM7P33993 719 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 NBL1P41271 181 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 SYKP43405 635 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 CLCN5P51795 746 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 NDUFA8P51970 172 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 DSC1Q08554 894 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 ZNF174Q15697 407 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 C15orf39Q6ZRI6 1047 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 OTOP3Q7RTS5 596 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 COLGALT2Q8IYK4 626 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 RNF149Q8NC42 400 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 CNNM3Q8NE01 707 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 CFAP54Q96N23 3096 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 RHOBTB2Q9BYZ6 727 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 XPNPEP1Q9NQW7 623 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 MRPL17Q9NRX2 175 aaKnown RBP15.47■□□□□ 0.07
LDLR-213ENST00000560502 BMP2KQ9NSY1 1161 aaPredicted RBP15.47■□□□□ 0.07
LDLR-213ENST00000560502 FAN1Q9Y2M0 1017 aa15.47■□□□□ 0.07
LDLR-213ENST00000560502 ASAP2O43150 1006 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 NEMFO60524 1076 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 TSPAN1O60635 241 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 PAPLNO95428 1278 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 CAVIN2O95810 425 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 POMCP01189 267 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 ALDH2P05091 517 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 CCDC192P0DO97 292 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 PCBP1Q15365 356 aaKnown RBP eCLIP15.46■□□□□ 0.07
LDLR-213ENST00000560502 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 IFNLR1Q8IU57 520 aaPredicted RBP15.46■□□□□ 0.07
LDLR-213ENST00000560502 TCP11Q8WWU5 503 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 ACSF2Q96CM8 615 aaPredicted RBP15.46■□□□□ 0.07
LDLR-213ENST00000560502 CCDC51Q96ER9 411 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 AK8Q96MA6 479 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 FAM193BQ96PV7 902 aaPredicted RBP15.46■□□□□ 0.07
LDLR-213ENST00000560502 RPS6KC1Q96S38 1066 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 EIF2AQ9BY44 585 aaKnown RBP15.46■□□□□ 0.07
LDLR-213ENST00000560502 TSPY26PQ9H489 355 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 UBN1Q9NPG3 1134 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 RGL1Q9NZL6 768 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 KCNH3Q9ULD8 1083 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 DUSP12Q9UNI6 340 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 IPPQ9Y573 584 aa15.46■□□□□ 0.07
LDLR-213ENST00000560502 A0A1B0GVL5 298 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 ZBTB39O15060 712 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 CCNT1O60563 726 aaKnown RBP15.45■□□□□ 0.06
LDLR-213ENST00000560502 N4BP1O75113 896 aaKnown RBP15.45■□□□□ 0.06
LDLR-213ENST00000560502 ZNF202O95125 648 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 URODP06132 367 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 OR52Z1P0C646 297 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 NPR3P17342 541 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 TXLNAP40222 546 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 PTENP60484 403 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 TDGQ13569 410 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 KIAA0319Q5VV43 1072 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 ASCL5Q7RTU5 278 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 C4orf32Q8N8J7 132 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 DYDC2Q96IM9 177 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 SNX27Q96L92 541 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 MTRQ99707 1265 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 ZSWIM4Q9H7M6 989 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 KCNK12Q9HB15 430 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 RXFP1Q9HBX9 757 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 MAN1C1Q9NR34 630 aa15.45■□□□□ 0.06
LDLR-213ENST00000560502 PRG3Q9Y2Y8 225 aaPredicted RBP15.45■□□□□ 0.06
LDLR-213ENST00000560502 MYO15AQ9UKN7 3530 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 PRR23AA6NEV1 266 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 ARL5CA6NH57 179 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 WNT7AO00755 349 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 TEX28O15482 410 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 ERLIN2O94905 339 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 ADH1AP07327 375 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 ITGA4P13612 1032 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 AOC1P19801 751 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 AXLP30530 894 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 MLH1P40692 756 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 POU5F1BQ06416 359 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 CTTNQ14247 550 aaKnown RBP15.44■□□□□ 0.06
LDLR-213ENST00000560502 AMHR2Q16671 573 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 XKR9Q5GH70 373 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 NCAPH2Q6IBW4 605 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 DTHD1Q6ZMT9 781 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 OTUD6AQ7L8S5 288 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 TAS1R1Q7RTX1 841 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 GAD1Q99259 594 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 RAB34Q9BZG1 259 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 CSRNP2Q9H175 543 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 MFSD1Q9H3U5 465 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 MIOSQ9NXC5 875 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 SSX2IPQ9Y2D8 614 aa15.44■□□□□ 0.06
LDLR-213ENST00000560502 SPDYE4A6NLX3 237 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 F8W810 466 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 C2CD2LO14523 706 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 SLC26A4O43511 780 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 SLITRK3O94933 977 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 LYPLA2O95372 231 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 GLUD2P49448 558 aa15.43■□□□□ 0.06
LDLR-213ENST00000560502 DSG1Q02413 1049 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms