RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CSRNP2Q9H175 543 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 NXF3Q9H4D5 531 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 DHX33Q9H6R0 707 aaKnown RBP11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 RXFP1Q9HBX9 757 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 KLK14Q9P0G3 267 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 ADAM28Q9UKQ2 775 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 PPME1Q9Y570 386 aa11.67□□□□□ -0.54
CDC42BPB-207ENST00000560492 CACNA1IQ9P0X4 2223 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 LRRN2O75325 713 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 BAG4O95429 457 aaKnown RBP11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 PPP2R5CQ13362 524 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 SNW1Q13573 536 aaKnown RBP11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 HTR4Q13639 388 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 CTTNQ14247 550 aaKnown RBP11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 MXD4Q14582 209 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 PPM1LQ5SGD2 360 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 B3GNT9Q6UX72 402 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 TPH2Q8IWU9 490 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 CCDC51Q96ER9 411 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 FAM20AQ96MK3 541 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 AIFM3Q96NN9 605 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 HS3ST6Q96QI5 342 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 GPR62Q9BZJ7 368 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 MIOSQ9NXC5 875 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 RGL1Q9NZL6 768 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 WRAP73Q9P2S5 460 aaPredicted RBP11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 VAV3Q9UKW4 847 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 KCNJ14Q9UNX9 436 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 GIT1Q9Y2X7 761 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 ZNF292O60281 2723 aa11.66□□□□□ -0.54
CDC42BPB-207ENST00000560492 SF3B1O75533 1304 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 FAM205CA6NFA0 338 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 CASTOR2A6NHX0 329 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 ZBTB39O15060 712 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 CCL16O15467 120 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 ZMYND10O75800 440 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 GCFC2P16383 781 aaKnown RBP11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 XBP1P17861 261 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 HSPA4P34932 840 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 GPC5P78333 572 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 NTHL1P78549 312 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 DSC1Q08554 894 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 GRIK3Q13003 919 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 EPHA7Q15375 998 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 PPP4R3AQ6IN85 833 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 GALNT17Q6IS24 598 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 PARM1Q6UWI2 310 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 MTSS1LQ765P7 747 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 C4orf19Q8IY42 314 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 DAGLBQ8NCG7 672 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 FGF14Q92915 247 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 SECISBP2LQ93073 1101 aaKnown RBP11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 MBOAT7Q96N66 472 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 RHOBTB2Q9BYZ6 727 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 ZSWIM4Q9H7M6 989 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 SLC2A4RGQ9NR83 387 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 FNIP2Q9P278 1114 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 CACNG4Q9UBN1 327 aa11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 ZFP37Q9Y6Q3 630 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPB-207ENST00000560492 COL4A3Q01955 1670 aa11.65□□□□□ -0.55
CDC42BPB-207ENST00000560492 KANSL1LA0AUZ9 987 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 LRRIQ4A6NIV6 560 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 XYLBO75191 536 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 C8AP07357 584 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 ARF4P18085 180 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 LIG1P18858 919 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 PTENP60484 403 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 CSTF1Q05048 431 aaKnown RBP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 HSP90AA2PQ14568 343 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 PCBP1Q15365 356 aaKnown RBP eCLIP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 MLF2Q15773 248 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 PSMD5Q16401 504 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 RSPO4Q2I0M5 234 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 FAM171A1Q5VUB5 890 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 SLC27A1Q6PCB7 646 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 PIK3AP1Q6ZUJ8 805 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 MAEAQ7L5Y9 396 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 RNF168Q8IYW5 571 aaPredicted RBP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 ATRIPQ8WXE1 791 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 NAP1L4Q99733 375 aaKnown RBP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 KXD1Q9BQD3 176 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 RPP25Q9BUL9 199 aaKnown RBP11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 CHST7Q9NS84 486 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 CDH7Q9ULB5 785 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 CYP46A1Q9Y6A2 500 aa11.64□□□□□ -0.55
CDC42BPB-207ENST00000560492 FAM170BA6NMN3 283 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 ANHXE9PGG2 379 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 B4GALT5O43286 388 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 REC8O95072 547 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 GLULP15104 373 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 CD72P21854 359 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 PFKPQ01813 784 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 CAPSQ13938 189 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 RTP2Q5QGT7 225 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 VARS2Q5ST30 1063 aaKnown RBP11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 RUFY3Q7L099 469 aa11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 CENPQQ7L2Z9 268 aaPredicted RBP11.63□□□□□ -0.55
CDC42BPB-207ENST00000560492 SLC7A14Q8TBB6 771 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms