RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 TTLL13PA6NNM8 815 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 LRRIQ3A6PVS8 624 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-209ENST00000560463 B4GALT5O43286 388 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 HSPA8P11142 646 aaKnown RBP9.34□□□□□ -0.91
TRAF3-209ENST00000560463 RFX1P22670 979 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 PON1P27169 355 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 KRT9P35527 623 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 KCNJ6P48051 423 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-209ENST00000560463 ACOT2P49753 483 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 MXI1P50539 228 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 MYL7Q01449 175 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 PTPN21Q16825 1174 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 C1orf220Q5T0J3 134 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 FAM43BQ6ZT52 329 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-209ENST00000560463 CACNA2D4Q7Z3S7 1137 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 ZBTB33Q86T24 672 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 FMNL3Q8IVF7 1028 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 BRSK2Q8IWQ3 736 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 USP38Q8NB14 1042 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 OR8K1Q8NGG5 319 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 PPP1R13LQ8WUF5 828 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 CPLX3Q8WVH0 158 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 FAM81BQ96LP2 452 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 PPP1R16BQ96T49 567 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 DNAJC7Q99615 494 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 RNF208Q9H0X6 261 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 CDT1Q9H211 546 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 TMX1Q9H3N1 280 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 PDZD7Q9H5P4 517 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 CDHR5Q9HBB8 845 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 ABHD10Q9NUJ1 306 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 AGPAT5Q9NUQ2 364 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 GCNT4Q9P109 453 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 CEP72Q9P209 647 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 MYO6Q9UM54 1294 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 NOD1Q9Y239 953 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 COQ4Q9Y3A0 265 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.34□□□□□ -0.91
TRAF3-209ENST00000560463 ALPK3Q96L96 1907 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 TTC3P53804 2025 aa9.34□□□□□ -0.91
TRAF3-209ENST00000560463 MROH7Q68CQ1 1323 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 ARVCFO00192 962 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 ZC3H11AO75152 810 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CSDE1O75534 798 aaKnown RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CLTAP09496 248 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 TRIM49P0CI25 452 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 TRIM49CP0CI26 452 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 TNNI1P19237 187 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 SLC9A1P19634 815 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 FECHP22830 423 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 MSNP26038 577 aaKnown RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 KLK7P49862 253 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 FXR1P51114 621 aaKnown RBP eCLIP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 ADKP55263 362 aaKnown RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 DLG4P78352 724 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 PPP3CAQ08209 521 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 MGAT3Q09327 533 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 MTFR1Q15390 333 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CBWD6Q4V339 395 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 EPC2Q52LR7 807 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CBWD3Q5JTY5 395 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 FAM26DQ5JW98 314 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CBWD5Q5RIA9 395 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 KLHDC7AQ5VTJ3 777 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 EEF1DP3Q658K8 133 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 SMYD5Q6GMV2 418 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 TRIM65Q6PJ69 517 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 C15orf39Q6ZRI6 1047 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 ZSCAN30Q86W11 494 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 NT5DC4Q86YG4 428 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 WDR49Q8IV35 697 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CD302Q8IX05 232 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CCDC155Q8N6L0 562 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 ANKLE1Q8NAG6 615 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 FBXL13Q8NEE6 735 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 PLEKHO2Q8TD55 490 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 SYN2Q92777 582 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CCDC127Q96BQ5 260 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CPB2Q96IY4 423 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 ZNF333Q96JL9 665 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 DEFB118Q96PH6 123 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 TSPAN18Q96SJ8 248 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CGRRF1Q99675 332 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 BAG1Q99933 345 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CRACR2AQ9BSW2 395 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 LSM14BQ9BX40 385 aaKnown RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 SENP6Q9GZR1 1112 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 TMEM117Q9H0C3 514 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 KCNF1Q9H3M0 494 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 RPF1Q9H9Y2 349 aaKnown RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CHST12Q9NRB3 414 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 FAM207AQ9NSI2 230 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 ZNHIT6Q9NWK9 470 aaKnown RBP9.33□□□□□ -0.92
TRAF3-209ENST00000560463 GINS2Q9Y248 185 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 CDY2AQ9Y6F7 541 aa9.33□□□□□ -0.92
TRAF3-209ENST00000560463 GPR182O15218 404 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 ARHGAP6O43182 974 aa9.32□□□□□ -0.92
TRAF3-209ENST00000560463 B4GALT4O60513 344 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms