RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 CMTM4Q8IZR5 234 aa7.07□□□□□ -1.28
MARK3-220ENST00000560417 REPS2Q8NFH8 660 aa7.07□□□□□ -1.28
MARK3-220ENST00000560417 RPL10LQ96L21 214 aaKnown RBP7.07□□□□□ -1.28
MARK3-220ENST00000560417 UHRF1Q96T88 793 aaPredicted RBP7.07□□□□□ -1.28
MARK3-220ENST00000560417 NR2E1Q9Y466 385 aa7.07□□□□□ -1.28
MARK3-220ENST00000560417 SLC26A4O43511 780 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 B4GALT4O60513 344 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 PEX14O75381 377 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 GPR32O75388 356 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 CNOT4O95628 575 aaKnown RBP7.06□□□□□ -1.28
MARK3-220ENST00000560417 ALOX15P16050 662 aaPredicted RBP7.06□□□□□ -1.28
MARK3-220ENST00000560417 SYN1P17600 705 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 DDCP20711 480 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 FPR1P21462 350 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 CASRP41180 1078 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 RAB1AP62820 205 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 FAM193AP78312 1265 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 SP140Q13342 867 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 HDAC1Q13547 482 aaPredicted RBP7.06□□□□□ -1.28
MARK3-220ENST00000560417 SEMA5AQ13591 1074 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 PPP4R4Q6NUP7 873 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 FAM124AQ86V42 546 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 TMX3Q96JJ7 454 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 VRK1Q99986 396 aaPredicted RBP7.06□□□□□ -1.28
MARK3-220ENST00000560417 SENP6Q9GZR1 1112 aaPredicted RBP7.06□□□□□ -1.28
MARK3-220ENST00000560417 BHMT2Q9H2M3 363 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 LDAHQ9H6V9 325 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 MSL2Q9HCI7 577 aa7.06□□□□□ -1.28
MARK3-220ENST00000560417 AJAP1Q9UKB5 411 aaPredicted RBP7.06□□□□□ -1.28
MARK3-220ENST00000560417 CAPN8A6NHC0 703 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 ARIH2O95376 493 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 MALP21145 153 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 KCNC1P48547 511 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 CTXN1P60606 82 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 SNAPC2Q13487 334 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 CNN3Q15417 329 aaKnown RBP7.05□□□□□ -1.28
MARK3-220ENST00000560417 ZNF124Q15973 351 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 ZNF568Q3ZCX4 644 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 KRT40Q6A162 431 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 CIAPIN1Q6FI81 312 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 CCDC149Q6ZUS6 474 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 MAEAQ7L5Y9 396 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 DAAM2Q86T65 1068 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 RSPH3Q86UC2 560 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 COL23A1Q86Y22 540 aaPredicted RBP7.05□□□□□ -1.28
MARK3-220ENST00000560417 SAMD3Q8N6K7 520 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 MDM1Q8TC05 714 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 PMM1Q92871 262 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 FAM167AQ96KS9 214 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 KCNH6Q9H252 994 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 TMEM140Q9NV12 185 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 USP25Q9UHP3 1055 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 FAM50BQ9Y247 325 aa7.05□□□□□ -1.28
MARK3-220ENST00000560417 NT5C1B-RDH14C9J2C7 533 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 SLC5A1P13866 664 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 TYRP14679 529 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 IL2RBP14784 551 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 FLT3LGP49771 235 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 CACNB3P54284 484 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 GJA9P57773 515 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 ZNF280AP59817 542 aaPredicted RBP7.04□□□□□ -1.28
MARK3-220ENST00000560417 GPSM2P81274 684 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 PKN1Q16512 942 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 KIAA0753Q2KHM9 967 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 FAM47AQ5JRC9 791 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 IL31Q6EBC2 164 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 PDZD4Q76G19 769 aaPredicted RBP7.04□□□□□ -1.28
MARK3-220ENST00000560417 HEATR3Q7Z4Q2 680 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 DCBLD1Q8N8Z6 715 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 CEP95Q96GE4 821 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 CDC5LQ99459 802 aaKnown RBP7.04□□□□□ -1.28
MARK3-220ENST00000560417 AGO3Q9H9G7 860 aaKnown RBP7.04□□□□□ -1.28
MARK3-220ENST00000560417 ATP6V0A4Q9HBG4 840 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 IL23AQ9NPF7 189 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 LMBRD1Q9NUN5 540 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 PUF60Q9UHX1 559 aaKnown RBP7.04□□□□□ -1.28
MARK3-220ENST00000560417 PCDHA3Q9Y5H8 950 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 ZMYM3Q14202 1370 aa7.04□□□□□ -1.28
MARK3-220ENST00000560417 PMM2O15305 246 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 SASH1O94885 1247 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 C8AP07357 584 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 NBPF7P0C2Y1 421 aaPredicted RBP7.03□□□□□ -1.28
MARK3-220ENST00000560417 PTPN7P35236 360 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 GZMKP49863 264 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 NEK3P51956 506 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 RAC3P60763 192 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 APBA1Q02410 837 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 DUSP8Q13202 625 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 MRPL49Q13405 166 aaKnown RBP7.03□□□□□ -1.28
MARK3-220ENST00000560417 RIN1Q13671 783 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 PLS1Q14651 629 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 MFSD14BQ5SR56 506 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 NT5DC1Q5TFE4 455 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 RNF220Q5VTB9 566 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 BORAQ6PGQ7 559 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 DARS2Q6PI48 645 aaKnown RBP7.03□□□□□ -1.28
MARK3-220ENST00000560417 C11orf96Q7Z7L8 435 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 C1QL4Q86Z23 238 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 PLXDC1Q8IUK5 500 aa7.03□□□□□ -1.28
MARK3-220ENST00000560417 GPR135Q8IZ08 494 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms