RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SFI1A8K8P3 1242 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 CXCL14O95715 111 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 POMCP01189 267 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 HSP90AA1P07900 732 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 MLH1P40692 756 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 CEBPZQ03701 1054 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 EEF1DP3Q658K8 133 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 CES5AQ6NT32 575 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 LINC00301Q8NCQ3 95 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 RPGRIP1Q96KN7 1286 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 MFSD14AQ96MC6 490 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 ZFP42Q96MM3 310 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 CLIC6Q96NY7 704 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 ADPGKQ9BRR6 497 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 ADAM7Q9H2U9 754 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 PTPRHQ9HD43 1115 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 MIOSQ9NXC5 875 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 TNFSF13BQ9Y275 285 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 USP20Q9Y2K6 914 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 NR2E1Q9Y466 385 aa16.69■□□□□ 0.26
SNRPA1-210ENST00000560383 ALDH2P05091 517 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 ZSCAN22P10073 491 aaPredicted RBP16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 AKAP5P24588 427 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 DDIT3P35638 169 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 SCNN1GP51170 649 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 ZNF131P52739 623 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 ZXDAP98168 799 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 RAD51AP2Q09MP3 1159 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 PTPN14Q15678 1187 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 DCAF4L1Q3SXM0 396 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 ATF7IP2Q5U623 682 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 TRIM67Q6ZTA4 783 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 PPFIBP1Q86W92 1011 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 COLGALT2Q8IYK4 626 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 KRI1Q8N9T8 703 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 TMEM161BQ8NDZ6 487 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 ACO2Q99798 780 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 VN1R3Q9BXE9 311 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 GBP3Q9H0R5 595 aa16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 LARSQ9P2J5 1176 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-210ENST00000560383 NPHP3-ACAD11A0A0J9YXS1 232 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 SLC16A4O15374 487 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 YEATS4O95619 227 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 EFEMP2O95967 443 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 ATXN8OSP0DMR3 200 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 LIG1P18858 919 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 SCP2P22307 547 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 CA8P35219 290 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 MTHFRP42898 656 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 SMTNP53814 917 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 MCM6Q14566 821 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 PTPN21Q16825 1174 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 KIAA1841Q6NSI8 718 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 GPBP1Q86WP2 473 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 TMEM87AQ8NBN3 555 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 LARP4BQ92615 738 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 RIPOR3Q96MK2 946 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 ZNF396Q96N95 335 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 FAM193BQ96PV7 902 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 REEP2Q9BRK0 252 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 APOL6Q9BWW8 343 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 MRPL4Q9BYD3 311 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 STK17AQ9UEE5 414 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 CCDC39Q9UFE4 941 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 FAN1Q9Y2M0 1017 aa16.67■□□□□ 0.26
SNRPA1-210ENST00000560383 PIEZO1Q92508 2521 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 TMEM221A6NGB7 291 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 M0R296 226 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 ABLIM1O14639 778 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 NRP1O14786 923 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 PPP6R2O75170 966 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 BRD1O95696 1058 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 F13A1P00488 732 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 MAPTP10636 758 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 PROZP22891 400 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 NCKAP1LP55160 1127 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 SIGLEC14Q08ET2 396 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 GRIK3Q13003 919 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 TMEM132AQ24JP5 1023 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 APBB1IPQ7Z5R6 666 aaPredicted RBP16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 KMT2EQ8IZD2 1858 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 SLC22A17Q8WUG5 538 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 AUTS2Q8WXX7 1259 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 POMKQ9H5K3 350 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 MARCH5Q9NX47 278 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 SNTG2Q9NY99 539 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 PARP2Q9UGN5 583 aa16.66■□□□□ 0.26
SNRPA1-210ENST00000560383 H0YCG3 227 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 PTGESO14684 152 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 SPTLC2O15270 562 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 RECQL4O94761 1208 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 TXLNAP40222 546 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 PKP1Q13835 747 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 STK38Q15208 465 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 ATL3Q6DD88 541 aa16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 RNF168Q8IYW5 571 aaPredicted RBP16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 TARS2Q9BW92 718 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-210ENST00000560383 APOL5Q9BWW9 433 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms