RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 PHF20Q9BVI0 1012 aa18.5■□□□□ 0.55
HERC1-207ENST00000560316 TRIM6Q9C030 488 aaPredicted RBP18.5■□□□□ 0.55
HERC1-207ENST00000560316 SLKQ9H2G2 1235 aaPredicted RBP18.5■□□□□ 0.55
HERC1-207ENST00000560316 KLK14Q9P0G3 267 aa18.5■□□□□ 0.55
HERC1-207ENST00000560316 INO80B-WBP1J3KQ70 363 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 ASAP2O43150 1006 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 HNRNPA1P09651 372 aaKnown RBP eCLIP18.49■□□□□ 0.55
HERC1-207ENST00000560316 MAGEA9P43362 315 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 PTENP60484 403 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 RSPO2Q6UXX9 243 aaPredicted RBP18.49■□□□□ 0.55
HERC1-207ENST00000560316 CDR2LQ86X02 465 aaPredicted RBP18.49■□□□□ 0.55
HERC1-207ENST00000560316 TCP11Q8WWU5 503 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 CLDN23Q96B33 292 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 C22orf23Q9BZE7 217 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 NCOA5Q9HCD5 579 aaKnown RBP18.49■□□□□ 0.55
HERC1-207ENST00000560316 SH3GLB2Q9NR46 395 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 HCFC1R1Q9NWW0 138 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 DDX25Q9UHL0 483 aaKnown RBP18.49■□□□□ 0.55
HERC1-207ENST00000560316 VAV3Q9UKW4 847 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 PCDHA4Q9UN74 947 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 PPME1Q9Y570 386 aa18.49■□□□□ 0.55
HERC1-207ENST00000560316 ZBTB39O15060 712 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 ADAM12O43184 909 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 DKC1O60832 514 aaKnown RBP eCLIP18.48■□□□□ 0.55
HERC1-207ENST00000560316 P4HBP07237 508 aaKnown RBP18.48■□□□□ 0.55
HERC1-207ENST00000560316 ADRB1P08588 477 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 IFNAR1P17181 557 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 YWHABP31946 246 aaKnown RBP18.48■□□□□ 0.55
HERC1-207ENST00000560316 CCT2P78371 535 aaKnown RBP18.48■□□□□ 0.55
HERC1-207ENST00000560316 NCBP1Q09161 790 aaKnown RBP18.48■□□□□ 0.55
HERC1-207ENST00000560316 GRIK3Q13003 919 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 PPP2R5CQ13362 524 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 HSP90AA2PQ14568 343 aaPredicted RBP18.48■□□□□ 0.55
HERC1-207ENST00000560316 LPAL2Q16609 132 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 CEP57Q86XR8 500 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 ING5Q8WYH8 240 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 MTRQ99707 1265 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 PRMT8Q9NR22 394 aaPredicted RBP18.48■□□□□ 0.55
HERC1-207ENST00000560316 PARP2Q9UGN5 583 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 GMEB2Q9UKD1 530 aa18.48■□□□□ 0.55
HERC1-207ENST00000560316 SF3B1O75533 1304 aaKnown RBP eCLIP18.48■□□□□ 0.551e-7■■■■■ 51.7
HERC1-207ENST00000560316 CHD8Q9HCK8 2581 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 M0R2N6 131 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 TBC1D4O60343 1298 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 XYLBO75191 536 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 NPTXRO95502 500 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 ARF4P18085 180 aaPredicted RBP18.47■□□□□ 0.55
HERC1-207ENST00000560316 MBTD1Q05BQ5 628 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 FZD5Q13467 585 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 PCBP1Q15365 356 aaKnown RBP eCLIP18.47■□□□□ 0.55
HERC1-207ENST00000560316 PSMD5Q16401 504 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 AMHR2Q16671 573 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 INF2Q27J81 1249 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 XKR9Q5GH70 373 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 FAM171A1Q5VUB5 890 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 MOXD1Q6UVY6 613 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 NPAS3Q8IXF0 933 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 HACE1Q8IYU2 909 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 BLIDQ8IZY5 108 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 LNX1Q8TBB1 728 aaPredicted RBP18.47■□□□□ 0.55
HERC1-207ENST00000560316 SLC7A14Q8TBB6 771 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 JAKMIP1Q96N16 626 aaKnown RBP18.47■□□□□ 0.55
HERC1-207ENST00000560316 LXNQ9BS40 222 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 TTPALQ9BTX7 342 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 PLA2G2FQ9BZM2 168 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 XPNPEP1Q9NQW7 623 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 HEBP1Q9NRV9 189 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 RGL1Q9NZL6 768 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 CFAP47Q6ZTR5 3102 aa18.47■□□□□ 0.55
HERC1-207ENST00000560316 CASTOR2A6NHX0 329 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 NCAM2O15394 837 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 B4GALT5O43286 388 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 HOXA9P31269 272 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 RPS9P46781 194 aaKnown RBP18.46■□□□□ 0.55
HERC1-207ENST00000560316 SPEM2Q0P670 501 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 MTAPQ13126 283 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 ZNF852Q6ZMS4 543 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 C4orf19Q8IY42 314 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 ASAP3Q8TDY4 903 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 PIK3R5Q8WYR1 880 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 NELL2Q99435 816 aa18.46■□□□□ 0.55
HERC1-207ENST00000560316 DNMT3BQ9UBC3 853 aaKnown RBP18.46■□□□□ 0.55
HERC1-207ENST00000560316 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.46■□□□□ 0.55
HERC1-207ENST00000560316 CACNA1GO43497 2377 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 SHISA7A6NL88 538 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 KIF4AO95239 1232 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 CTTNQ14247 550 aaKnown RBP18.45■□□□□ 0.54
HERC1-207ENST00000560316 MXD4Q14582 209 aaPredicted RBP18.45■□□□□ 0.54
HERC1-207ENST00000560316 NPY5RQ15761 445 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 PABPC1LQ4VXU2 614 aaKnown RBP18.45■□□□□ 0.54
HERC1-207ENST00000560316 AXDND1Q5T1B0 1012 aaPredicted RBP18.45■□□□□ 0.54
HERC1-207ENST00000560316 OTUD6AQ7L8S5 288 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 IFNLR1Q8IU57 520 aaPredicted RBP18.45■□□□□ 0.54
HERC1-207ENST00000560316 MCRS1Q96EZ8 462 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 DYDC2Q96IM9 177 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 YTHDC1Q96MU7 727 aaKnown RBP18.45■□□□□ 0.54
HERC1-207ENST00000560316 KCNMB3Q9NPA1 279 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 NOTCH4Q99466 2003 aa18.45■□□□□ 0.54
HERC1-207ENST00000560316 IRX6P78412 446 aaPredicted RBP18.44■□□□□ 0.54
HERC1-207ENST00000560316 CYP4A11Q02928 519 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms