RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 MFSD6Q6ZSS7 791 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 TRPM8Q7Z2W7 1104 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 APBB1IPQ7Z5R6 666 aaPredicted RBP6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 COL23A1Q86Y22 540 aaPredicted RBP6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 SLITRK4Q8IW52 837 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 TRIM42Q8IWZ5 723 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 LMNTD2Q8IXW0 634 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 CSGALNACT2Q8N6G5 542 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 FANCBQ8NB91 859 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 DRAXINQ8NBI3 349 aaPredicted RBP6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 TAF4BQ92750 862 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 TBC1D31Q96DN5 1066 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 STAMBPL1Q96FJ0 436 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 BICD1Q96G01 975 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 SHDQ96IW2 340 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 ZNF317Q96PQ6 595 aaPredicted RBP6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 STRBPQ96SI9 672 aaKnown RBP6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 PBX4Q9BYU1 374 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 RAB17Q9H0T7 212 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 NAPBQ9H115 298 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 MLXIPQ9HAP2 919 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 AGPAT5Q9NUQ2 364 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 ACTR10Q9NZ32 417 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 ZSWIM5Q9P217 1185 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 FAM153AQ9UHL3 310 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 ANAPC4Q9UJX5 808 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 PRR12Q9ULL5 1215 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 DIS3Q9Y2L1 958 aaKnown RBP6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 GDAQ9Y2T3 454 aa6.45□□□□□ -1.38
SNRPA1-209ENST00000560307 RGPD5Q99666 1765 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 MYH10P35580 1976 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRD1A4D1F6 860 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TTC36A6NLP5 189 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 F8VZ95 297 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 NFKBIEO00221 500 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 RAD51CO43502 376 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 PPFIA2O75334 1257 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 ATP5HO75947 161 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 RTN3O95197 1032 aaPredicted RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 BAG3O95817 575 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 OAS1P00973 400 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 AGTP01019 485 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 RPSAP08865 295 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 PDE6AP16499 860 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TAL1P17542 331 aaPredicted RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 RXRAP19793 462 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 RXRBP28702 533 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 HPDP32754 393 aaPredicted RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 PDE6BP35913 854 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 MMP13P45452 471 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 CCDC15Q0P6D6 951 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TRIM28Q13263 835 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 DYNC1I2Q13409 638 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 SEC23AQ15436 765 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 PKN1Q16512 942 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 GALNTL6Q49A17 601 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 ACCSLQ4AC99 568 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 SLC9C1Q4G0N8 1177 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 CCDC152Q4G0S7 254 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 VWA3BQ502W6 1294 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC24Q50LG9 513 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 RPS26P11Q5JNZ5 115 aaPredicted RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 SPDYAQ5MJ70 313 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 CNNM4Q6P4Q7 775 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 MTHFD1LQ6UB35 978 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TMC3Q7Z5M5 1100 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 SESTD1Q86VW0 696 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 IFNL3Q8IZI9 196 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TTC5Q8N0Z6 440 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 GALNT15Q8N3T1 639 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 RASGEF1CQ8N431 466 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 AGAP11Q8TF27 550 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 ATXN2LQ8WWM7 1075 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 GATAD2BQ8WXI9 593 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 IFT81Q8WYA0 676 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 LPIN2Q92539 896 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TP53INP1Q96A56 240 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 AK8Q96MA6 479 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 ZNF570Q96NI8 536 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TRAPPC9Q96Q05 1148 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 RAB3IPQ96QF0 476 aaPredicted RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 KRT12Q99456 494 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 C7orf25Q9BPX7 421 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 PAIP2Q9BPZ3 127 aaKnown RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 UBAC1Q9BSL1 405 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 CCDC28BQ9BUN5 200 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TXLNGYQ9BZA5 131 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 NACAP1Q9BZK3 213 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 KIF9Q9HAQ2 790 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 SH3GLB2Q9NR46 395 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 CEP72Q9P209 647 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TTC7AQ9ULT0 858 aaPredicted RBP6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 DUSP10Q9Y6W6 482 aa6.44□□□□□ -1.38
SNRPA1-209ENST00000560307 TOGARAM1Q9Y4F4 1720 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 A0A0A6YYK5 440 aaPredicted RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 TRIM49BA6NDI0 452 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CCDC169A6NNP5 214 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 ZBTB42B2RXF5 422 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 PGRMC1O00264 195 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms