RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 CEP120Q8N960 986 aa13.24□□□□□ -0.29
HERC1-205ENST00000559886 SQORQ9Y6N5 450 aa13.24□□□□□ -0.29
HERC1-205ENST00000559886 LRRIQ3A6PVS8 624 aaPredicted RBP13.23□□□□□ -0.29
HERC1-205ENST00000559886 POU5F1Q01860 360 aaKnown RBP13.23□□□□□ -0.29
HERC1-205ENST00000559886 KCNMA1Q12791 1236 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 KYAT1Q16773 422 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 DCAF4L1Q3SXM0 396 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 C1orf53Q5VUE5 145 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 TRAF7Q6Q0C0 670 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 ST3GAL5Q9UNP4 418 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
HERC1-205ENST00000559886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.23□□□□□ -0.292e-8■■□□□ 11.5
HERC1-205ENST00000559886 PMM2O15305 246 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 STX10O60499 249 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 PTMAP06454 111 aaKnown RBP13.23□□□□□ -0.29
HERC1-205ENST00000559886 CLTAP09496 248 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 GTF2H1P32780 548 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 KLK7P49862 253 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 WNT7BP56706 349 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 CBWD6Q4V339 395 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 CBWD3Q5JTY5 395 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 CBWD5Q5RIA9 395 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 CCDC186Q7Z3E2 898 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 ANKRD33Q7Z3H0 272 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 USP38Q8NB14 1042 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
HERC1-205ENST00000559886 CCDC51Q96ER9 411 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 POP1Q99575 1024 aaKnown RBP13.23□□□□□ -0.29
HERC1-205ENST00000559886 PDE11AQ9HCR9 933 aa13.23□□□□□ -0.29
HERC1-205ENST00000559886 GPR182O15218 404 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 P4HA2O15460 535 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 N4BP1O75113 896 aaKnown RBP13.22□□□□□ -0.29
HERC1-205ENST00000559886 STAG3L1P0CL83 205 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 DLATP10515 647 aaKnown RBP13.22□□□□□ -0.29
HERC1-205ENST00000559886 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
HERC1-205ENST00000559886 ENOX2Q16206 610 aaKnown RBP13.22□□□□□ -0.29
HERC1-205ENST00000559886 RALGAPA2Q2PPJ7 1873 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 FNBP1Q96RU3 617 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 CRACR2AQ9BSW2 395 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 TMEM106CQ9BVX2 250 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 OSBPL7Q9BZF2 842 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 MCOLN1Q9GZU1 580 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 AGO3Q9H9G7 860 aaKnown RBP13.22□□□□□ -0.29
HERC1-205ENST00000559886 NPTXRO95502 500 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 GRM5P41594 1212 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 GCLMP48507 274 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 GSDMDP57764 484 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 OSTNP61366 133 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 TRIM14Q14142 442 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 LPIN1Q14693 890 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 EXOC3L4Q17RC7 722 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 FIGNQ5HY92 759 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 GBP6Q6ZN66 633 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 TMEM192Q8IY95 271 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 NUP58Q9BVL2 599 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 EIF2AQ9BY44 585 aaKnown RBP13.22□□□□□ -0.29
HERC1-205ENST00000559886 TMEM117Q9H0C3 514 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 MMRN2Q9H8L6 949 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 RPF1Q9H9Y2 349 aaKnown RBP13.22□□□□□ -0.29
HERC1-205ENST00000559886 TMEM8AQ9HCN3 771 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 ERVK-5Q9HDB9 667 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 CHST12Q9NRB3 414 aa13.22□□□□□ -0.29
HERC1-205ENST00000559886 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
HERC1-205ENST00000559886 PQBP1O60828 265 aaKnown RBP13.21□□□□□ -0.29
HERC1-205ENST00000559886 GYPCP04921 128 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 GHRP10912 638 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 MYL7Q01449 175 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 NFX1Q12986 1120 aaKnown RBP13.21□□□□□ -0.29
HERC1-205ENST00000559886 BFSP2Q13515 415 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 SURF1Q15526 300 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 UBXN11Q5T124 520 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 PPFIBP1Q86W92 1011 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 PCMTD1Q96MG8 357 aaPredicted RBP13.21□□□□□ -0.29
HERC1-205ENST00000559886 TOX2Q96NM4 488 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 TTYH3Q9C0H2 523 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 TOPORSQ9NS56 1045 aaPredicted RBP13.21□□□□□ -0.29
HERC1-205ENST00000559886 PADI3Q9ULW8 664 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.29
HERC1-205ENST00000559886 PON1P27169 355 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 CD52P31358 61 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 MXI1P50539 228 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 KRT39Q6A163 491 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 DPY19L2P1Q6NXN4 242 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 C15orf39Q6ZRI6 1047 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 ZNF516Q92618 1163 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 IQCDQ96DY2 449 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 CGRRF1Q99675 332 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
HERC1-205ENST00000559886 PTPRJQ12913 1337 aa13.21□□□□□ -0.3
HERC1-205ENST00000559886 DCDC2CA8MYV0 355 aa13.2□□□□□ -0.3
HERC1-205ENST00000559886 RBAK-RBAKDNI3L0D1 243 aa13.2□□□□□ -0.3
HERC1-205ENST00000559886 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
HERC1-205ENST00000559886 MEFVO15553 781 aaPredicted RBP13.2□□□□□ -0.3
HERC1-205ENST00000559886 IL18RAPO95256 599 aa13.2□□□□□ -0.3
HERC1-205ENST00000559886 CXCL8P10145 99 aa13.2□□□□□ -0.3
HERC1-205ENST00000559886 SELPP16109 830 aa13.2□□□□□ -0.3
HERC1-205ENST00000559886 TNNI1P19237 187 aa13.2□□□□□ -0.3
HERC1-205ENST00000559886 SLC9A1P19634 815 aa13.2□□□□□ -0.3
HERC1-205ENST00000559886 PAK2Q13177 524 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms