RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 THP07101 528 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 LIG1P18858 919 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 PRPHP41219 470 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 ELAVL2Q12926 359 aaKnown RBP13.52□□□□□ -0.25
SPG11-219ENST00000559822 PTGDRQ13258 359 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 C8orf34Q49A92 452 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 KANK3Q6NY19 840 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 TAS1R1Q7RTX1 841 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 C4orf32Q8N8J7 132 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 IGSF22Q8N9C0 903 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 BSNDQ8WZ55 320 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 UPF2Q9HAU5 1272 aaKnown RBP13.52□□□□□ -0.25
SPG11-219ENST00000559822 DDX19AQ9NUU7 478 aaKnown RBP13.52□□□□□ -0.25
SPG11-219ENST00000559822 SNTG2Q9NY99 539 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 LIMD1Q9UGP4 676 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 DNM3Q9UQ16 869 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.25
SPG11-219ENST00000559822 RECQL4O94761 1208 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 BRD1O95696 1058 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 NBR1Q14596 966 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 RILPL1Q5EBL4 403 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 ATF7IP2Q5U623 682 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 PDXDC1Q6P996 788 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 DTHD1Q6ZMT9 781 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 ALYREFQ86V81 257 aaKnown RBP13.51□□□□□ -0.25
SPG11-219ENST00000559822 RIN2Q8WYP3 895 aaPredicted RBP13.51□□□□□ -0.25
SPG11-219ENST00000559822 DRC1Q96MC2 740 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 GPR62Q9BZJ7 368 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 ZDHHC7Q9NXF8 308 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 PCDHB6Q9Y5E3 794 aa13.51□□□□□ -0.25
SPG11-219ENST00000559822 CLUHO75153 1309 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 TRIOO75962 3097 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 CCDC195A0A1B0GUA6 201 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 F8W810 466 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 K7ERI5 159 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 ASGR2P07307 311 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 AVPR2P30518 371 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 MRE11P49959 708 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 TOB1P50616 345 aaPredicted RBP13.5□□□□□ -0.25
SPG11-219ENST00000559822 DMP1Q13316 513 aaPredicted RBP13.5□□□□□ -0.25
SPG11-219ENST00000559822 ECM1Q16610 540 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 KCTD17Q8N5Z5 321 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 SMG7Q92540 1137 aaKnown RBP13.5□□□□□ -0.25
SPG11-219ENST00000559822 TTPALQ9BTX7 342 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 TIPINQ9BVW5 301 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 MFSD1Q9H3U5 465 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 C17orf75Q9HAS0 396 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 PIDD1Q9HB75 910 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 WDR6Q9NNW5 1121 aaKnown RBP13.5□□□□□ -0.25
SPG11-219ENST00000559822 IGSF9Q9P2J2 1179 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 KCNG1Q9UIX4 513 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 KMT2EQ8IZD2 1858 aa13.5□□□□□ -0.25
SPG11-219ENST00000559822 C2orf16Q68DN1 1984 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 PLXNA3P51805 1871 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 TTLL13PA6NNM8 815 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 CCDC169A6NNP5 214 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 PTGESO14684 152 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 TGM5O43548 720 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 PAPLNO95428 1278 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 MCM2P49736 904 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 YARSP54577 528 aaKnown RBP13.49□□□□□ -0.25
SPG11-219ENST00000559822 TDGQ13569 410 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 PALB2Q86YC2 1186 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 PRSS33Q8NF86 280 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 PIK3R5Q8WYR1 880 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 B3GALT6Q96L58 329 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 UROC1Q96N76 676 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 KIFC3Q9BVG8 833 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.49□□□□□ -0.25
SPG11-219ENST00000559822 TOPORSQ9NS56 1045 aaPredicted RBP13.49□□□□□ -0.25
SPG11-219ENST00000559822 TNFSF13BQ9Y275 285 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 GDAQ9Y2T3 454 aa13.49□□□□□ -0.25
SPG11-219ENST00000559822 RBM19Q9Y4C8 960 aaKnown RBP13.49□□□□□ -0.25
SPG11-219ENST00000559822 MYO10Q9HD67 2058 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 H3BQV1 296 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 RFPL2O75678 378 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 KIF4AO95239 1232 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 GBP2P32456 591 aaPredicted RBP13.48□□□□□ -0.25
SPG11-219ENST00000559822 NPTX2P47972 431 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 VCPP55072 806 aaKnown RBP13.48□□□□□ -0.25
SPG11-219ENST00000559822 PEX3P56589 373 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 PSMD5Q16401 504 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 ZNF568Q3ZCX4 644 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 RTP2Q5QGT7 225 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 IER5LQ5T953 404 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 FAM171A1Q5VUB5 890 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 EEF1DP3Q658K8 133 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 HASPINQ8TF76 798 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 RABGGTAQ92696 567 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 NXPE3Q969Y0 559 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 PAAF1Q9BRP4 392 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 CCDC94Q9BW85 323 aaPredicted RBP13.48□□□□□ -0.25
SPG11-219ENST00000559822 MRPL4Q9BYD3 311 aaKnown RBP13.48□□□□□ -0.25
SPG11-219ENST00000559822 PRKD2Q9BZL6 878 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms