RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 RARAP10276 462 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 PDE6CP51160 858 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 PMS2P54278 862 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 CYP24A1Q07973 514 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SLC20A2Q08357 652 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 BIRC3Q13489 604 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 TCEAL1Q15170 157 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 TTC31Q49AM3 519 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 PRAMEF18Q5VWM3 479 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SWSAP1Q6NVH7 229 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SV2AQ7L0J3 742 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SAMD7Q7Z3H4 446 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 NLRX1Q86UT6 975 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 FBXL13Q8NEE6 735 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 PPM1EQ8WY54 764 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 DDX1Q92499 740 aaKnown RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 VTI1AQ96AJ9 217 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 RPS6KC1Q96S38 1066 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 FAM213AQ9BRX8 229 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 RGS20O76081 388 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 MTA2O94776 668 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 NR3C2P08235 984 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 GZMAP12544 262 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 RXRBP28702 533 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SFNP31947 248 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 CHRNA3P32297 505 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SSTR3P32745 418 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 GPC3P51654 580 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 WNT7BP56706 349 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 CDR2Q01850 454 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SIX1Q15475 284 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 QPCTQ16769 361 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 NBPF12Q5TAG4 269 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 TAS1R3Q7RTX0 852 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SLC13A5Q86YT5 568 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 ARFGAP2Q8N6H7 521 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 MFSD14AQ96MC6 490 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 TIPINQ9BVW5 301 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 RASAL2Q9UJF2 1139 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 PNMA2Q9UL42 364 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 TLDC2A0PJX2 215 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 HNRNPDLO14979 420 aaKnown RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 PMM2O15305 246 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 CLDN3O15551 220 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 GRIN3BO60391 1043 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 FGFR4P22455 802 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SNRPFP62306 86 aaKnown RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 DAB2IPQ5VWQ8 1189 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 VSIG10LQ86VR7 867 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 CCDC60Q8IWA6 550 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 RAPGEF5Q92565 580 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 KAT2BQ92831 832 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 ZKSCAN4Q969J2 545 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 BICD1Q96G01 975 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 WNT8AQ9H1J5 351 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-216ENST00000559819 GTF3C4Q9UKN8 822 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 COQ4Q9Y3A0 265 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 PCDHA3Q9Y5H8 950 aa10.78□□□□□ -0.68
LRRC28-216ENST00000559819 FAM107AO95990 144 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 KCNA2P16389 499 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 CCND2P30279 289 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 COILP38432 576 aaPredicted RBP10.77□□□□□ -0.69
LRRC28-216ENST00000559819 SLC29A2Q14542 456 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 PPP2R5EQ16537 467 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 SNRNP48Q6IEG0 339 aaKnown RBP10.77□□□□□ -0.69
LRRC28-216ENST00000559819 B4GALNT4Q76KP1 1039 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 CYFIP1Q7L576 1253 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 CCDC105Q8IYK2 499 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 C1orf54Q8WWF1 131 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 CYFIP2Q96F07 1278 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 SEMA4AQ9H3S1 761 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 AZI2Q9H6S1 392 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.77□□□□□ -0.69
LRRC28-216ENST00000559819 VGLL3A8MV65 326 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 CTNND1O60716 968 aaKnown RBP10.77□□□□□ -0.69
LRRC28-216ENST00000559819 ERLIN2O94905 339 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 SNX1Q13596 522 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 CLEC16AQ2KHT3 1053 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 DENND2CQ68D51 928 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 SPOPLQ6IQ16 392 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 ACAD10Q6JQN1 1059 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 GPD1LQ8N335 351 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 CPA5Q8WXQ8 436 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 TLCD1Q96CP7 247 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 HERPUD2Q9BSE4 406 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 POLR3FQ9H1D9 316 aaPredicted RBP10.77□□□□□ -0.69
LRRC28-216ENST00000559819 MAP3K20Q9NYL2 800 aaKnown RBP10.77□□□□□ -0.69
LRRC28-216ENST00000559819 PCYOX1Q9UHG3 505 aa10.77□□□□□ -0.69
LRRC28-216ENST00000559819 GMNCA6NCL1 334 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 CFHP08603 1231 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 PRKCEQ02156 737 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 IFT88Q13099 833 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 MTERF2Q49AM1 385 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 RNF187Q5TA31 235 aaPredicted RBP10.76□□□□□ -0.69
LRRC28-216ENST00000559819 FBXW10Q5XX13 1052 aa10.76□□□□□ -0.69
LRRC28-216ENST00000559819 SAMD3Q8N6K7 520 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms