RNA–Protein interactions for RNA: ENST00000559588.5

IPO4-209, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-209ENST00000559588 INIPQ9NRY2 104 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 TCRBV5S4A2TA0A5A2 114 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 VARSP26640 1264 aaKnown RBP11.51□□□□□ -0.57
IPO4-209ENST00000559588 USP11P51784 963 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 MYBPC2Q14324 1141 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 PDXDC1Q6P996 788 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 INTS5Q6P9B9 1019 aaKnown RBP11.51□□□□□ -0.57
IPO4-209ENST00000559588 STKLD1Q8NE28 680 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 KLHL4Q9C0H6 718 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 PRKAG3Q9UGI9 489 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 FRMD4BQ9Y2L6 1034 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.51□□□□□ -0.57
IPO4-209ENST00000559588 BCL9O00512 1426 aa11.51□□□□□ -0.57
IPO4-209ENST00000559588 PDS5AQ29RF7 1337 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 CCDC194A0A1B0GVG4 234 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 OXSR1O95747 527 aaPredicted RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 IRF2BP1Q8IU81 584 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 ARHGAP24Q8N264 748 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 METTL13Q8N6R0 699 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 SH3TC2Q8TF17 1288 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 CCDC124Q96CT7 223 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 ZSCAN10Q96SZ4 725 aaPredicted RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 DHX36Q9H2U1 1008 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 TRNAU1APQ9NX07 287 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 APPL1Q9UKG1 709 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 PLAGL2Q9UPG8 496 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 TMED5Q9Y3A6 229 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 MARF1Q9Y4F3 1742 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 FCER1AP12319 257 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 ARL1P40616 181 aaPredicted RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 IL17AQ16552 155 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 GALNTL6Q49A17 601 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 KLHL35Q6PF15 583 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 SRBD1Q8N5C6 995 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 ZNF507Q8TCN5 953 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 TLCD1Q96CP7 247 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 PYM1Q9BRP8 204 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 CEP44Q9C0F1 390 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 LRMDAQ9H2I8 198 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 PPP1R1BQ9UD71 204 aaPredicted RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 SEC63Q9UGP8 760 aaKnown RBP11.5□□□□□ -0.57
IPO4-209ENST00000559588 NUB1Q9Y5A7 615 aa11.5□□□□□ -0.57
IPO4-209ENST00000559588 BICDL2A1A5D9 508 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 PTPN4P29074 926 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 C4orf50Q6ZRC1 276 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 ASRGL1Q7L266 308 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 NRG4Q8WWG1 115 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.49□□□□□ -0.57
IPO4-209ENST00000559588 FAM136AQ96C01 138 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 DCUN1D5Q9BTE7 237 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 LSM14BQ9BX40 385 aaKnown RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 MRPL1Q9BYD6 325 aaKnown RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 TRPC7Q9HCX4 862 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 ASIC3Q9UHC3 531 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 SPO11Q9Y5K1 396 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 N6AMT1Q9Y5N5 214 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 PHRF1Q9P1Y6 1649 aaKnown RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 POC1B-GALNT4F8VUJ3 575 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 MCF2LO15068 1137 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 ADCY6O43306 1168 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 THAP12O43422 761 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 CCDC22O60826 627 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 TRIP13Q15645 432 aaPredicted RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 PARP6Q2NL67 630 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 LETM2Q2VYF4 491 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 DAB2IPQ5VWQ8 1189 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 CYP4F22Q6NT55 531 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 CCDC84Q86UT8 332 aaPredicted RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 DDHD1Q8NEL9 900 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 SLC26A7Q8TE54 656 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 PAIP1Q9H074 479 aaKnown RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 AASDHPPTQ9NRN7 309 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 ATAD3AQ9NVI7 634 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 PHTF1Q9UMS5 762 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 ARHGAP10A1A4S6 786 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 RASA4BC9J798 803 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 RASA4O43374 803 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 LDHCP07864 332 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 OCM2P0CE71 109 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 OCMP0CE72 109 aaPredicted RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 KPNA1P52294 538 aaPredicted RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 MTMR2Q13614 643 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 LRRC41Q15345 812 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 WDR72Q3MJ13 1102 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 CROCCP2Q86T23 111 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 TRIML2Q8N7C3 387 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 SYT2Q8N9I0 419 aaPredicted RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 TBC1D16Q8TBP0 767 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 ANKS1AQ92625 1134 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 DGCR14Q96DF8 476 aaKnown RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 INPP4AQ96PE3 977 aaPredicted RBP11.49□□□□□ -0.57
IPO4-209ENST00000559588 THTPAQ9BU02 230 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 TMEM60Q9H2L4 133 aa11.49□□□□□ -0.57
IPO4-209ENST00000559588 LIN28AQ9H9Z2 209 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms