RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 TAS2R14Q9NYV8 317 aa12.15□□□□□ -0.46
CLPX-204ENST00000559152 RNF181Q9P0P0 153 aa12.15□□□□□ -0.46
CLPX-204ENST00000559152 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
CLPX-204ENST00000559152 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
CLPX-204ENST00000559152 GOLGA6L10A0A0M3HER8 536 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 LRRIQ4A6NIV6 560 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 TULP1O00294 542 aaPredicted RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 SORBS3O60504 671 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 GLI1P08151 1106 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 HSPA6P17066 643 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 RNASE9P60153 205 aaKnown RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 TARBP2Q15633 366 aaKnown RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 USP50Q70EL3 339 aaPredicted RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 NOP9Q86U38 636 aaKnown RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 KLHL7Q8IXQ5 586 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 TCP11Q8WWU5 503 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 ARHGEF26Q96DR7 871 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 GOLPH3Q9H4A6 298 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 UVRAGQ9P2Y5 699 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 TELO2Q9Y4R8 837 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 ARID2Q68CP9 1835 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 KIAA1217Q5T5P2 1943 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 MAFO75444 373 aaPredicted RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 CHRNB2P17787 502 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 TNNI1P19237 187 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 AP3M2P53677 418 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 SMYD5Q6GMV2 418 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 DPY19L2Q6NUT2 758 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 ZPBP2Q6X784 338 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 SLC47A2Q86VL8 602 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 PALB2Q86YC2 1186 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 GSPT2Q8IYD1 628 aaKnown RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 ASAP3Q8TDY4 903 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 BBXQ8WY36 941 aaPredicted RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 KAT5Q92993 513 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 CEP89Q96ST8 783 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 RUFY1Q96T51 708 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 JPH2Q9BR39 696 aaPredicted RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 PAGR1Q9BTK6 254 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 MROH8Q9H579 483 aa12.14□□□□□ -0.47
CLPX-204ENST00000559152 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.14□□□□□ -0.47
CLPX-204ENST00000559152 DDX3YO15523 660 aaKnown RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 SART1O43290 800 aaKnown RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 RAD51CO43502 376 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 ADCY3O60266 1144 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 HSF2BPO75031 334 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 GGPS1O95749 300 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 SYF2O95926 243 aaKnown RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 TCF7P36402 384 aaPredicted RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 SLC26A2P50443 739 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 FSTL1Q12841 308 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 KCTD2Q14681 263 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 ZACNQ401N2 412 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 IER5Q5VY09 327 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 PPP1R2P3Q6NXS1 205 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 MREGQ8N565 214 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 IFT81Q8WYA0 676 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 TRIM11Q96F44 468 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 MSTO1Q9BUK6 570 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 WNT8AQ9H1J5 351 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 TAF1DQ9H5J8 278 aaPredicted RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 GTF3C4Q9UKN8 822 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 FAN1Q9Y2M0 1017 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 ALG6Q9Y672 507 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 SBF1O95248 1867 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 A0A0B4J269 797 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 CYP1A2P05177 515 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 KRT5P13647 590 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 FMO1Q01740 532 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 MXD4Q14582 209 aaPredicted RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 ACAD10Q6JQN1 1059 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 PLPPR4Q7Z2D5 763 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 ZNF526Q8TF50 670 aaPredicted RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 GTF3C2Q8WUA4 911 aaPredicted RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 PKNOX2Q96KN3 472 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 GDAP1L1Q96MZ0 367 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 PCDHB18PQ96TA0 734 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 PCYT2Q99447 389 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 TOPORSQ9NS56 1045 aaPredicted RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 RBAKQ9NYW8 714 aaPredicted RBP12.13□□□□□ -0.47
CLPX-204ENST00000559152 COG5Q9UP83 839 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 PCDHB2Q9Y5E7 798 aa12.13□□□□□ -0.47
CLPX-204ENST00000559152 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
CLPX-204ENST00000559152 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 NOP56O00567 594 aaKnown RBP12.12□□□□□ -0.47
CLPX-204ENST00000559152 RNF40O75150 1001 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 CNMDO75829 334 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 FGGP02679 453 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 C4BPAP04003 597 aaKnown RBP12.12□□□□□ -0.47
CLPX-204ENST00000559152 MMEP08473 750 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 MYBL1P10243 752 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 GGCXP38435 758 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 CARSP49589 748 aaKnown RBP12.12□□□□□ -0.47
CLPX-204ENST00000559152 GRM1Q13255 1194 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 GPR162Q16538 588 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 TAF3Q5VWG9 929 aa12.12□□□□□ -0.47
CLPX-204ENST00000559152 ARMC9Q7Z3E5 817 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms