RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 ZNF623O75123 536 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 RECQL4O94761 1208 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 GNA14O95837 355 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 EOMESO95936 686 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 KRT13P13646 458 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 AKAP5P24588 427 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 PSMC2P35998 433 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 ACOT2P49753 483 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 EPHB4P54760 987 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 WDR5P61964 334 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 PPP2R3AQ06190 1150 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 SNRNP35Q16560 246 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 CCDC40Q4G0X9 1142 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 SEZ6Q53EL9 994 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 TMEM240Q5SV17 173 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 SPATA1Q5VX52 437 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 TTI2Q6NXR4 508 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 C16orf59Q7L2K0 433 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 MRPL10Q7Z7H8 261 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 USP37Q86T82 979 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 RTN4RL1Q86UN2 441 aaPredicted RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 NPAS4Q8IUM7 802 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM114A1Q8IWE2 563 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 BRSK2Q8IWQ3 736 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM186BQ8IYM0 893 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 ABI1Q8IZP0 508 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 RDH13Q8NBN7 331 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 SMG8Q8ND04 991 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 ENOX1Q8TC92 643 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM200AQ8TCP9 573 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 LPPQ93052 612 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 VWCEQ96DN2 955 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM212AQ96EL1 285 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 CEP63Q96MT8 703 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 ACAP3Q96P50 834 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 RPS6KC1Q96S38 1066 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 BPIFA3Q9BQP9 254 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 SRRTQ9BXP5 876 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 UBE2OQ9C0C9 1292 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 ELAC1Q9H777 363 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 RSAD1Q9HA92 442 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 TMEM161AQ9NX61 479 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 RBAKQ9NYW8 714 aaPredicted RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 MAGEC2Q9UBF1 373 aaPredicted RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 CPSF3Q9UKF6 684 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 NFE2L3Q9Y4A8 694 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 HES2Q9Y543 173 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 PCDHB7Q9Y5E2 793 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 SLC4A7Q9Y6M7 1214 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 TNRC18O15417 2968 aaPredicted RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 PDE4DIPQ5VU43 2346 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 GOLGA6L19H0YKK7 550 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 IKBKBO14920 756 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 AKAP3O75969 853 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 UPP2O95045 317 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 IL18RAPO95256 599 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 CXCL8P10145 99 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ATF7P17544 494 aaPredicted RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 MLH1P40692 756 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 TNFSF9P41273 254 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 CASP4P49662 377 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 DEFB103AP81534 67 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 SURF1Q15526 300 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ENOX2Q16206 610 aaKnown RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ZBTB41Q5SVQ8 909 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM117BQ6P1L5 589 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 GLB1LQ6UWU2 654 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 LRRC55Q6ZSA7 311 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 INTS8Q75QN2 995 aaKnown RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 FILIP1Q7Z7B0 1213 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ZNF598Q86UK7 904 aaKnown RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 CBWD2Q8IUF1 395 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 CREBRFQ8IUR6 639 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 CD302Q8IX05 232 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ZC3H3Q8IXZ2 948 aaKnown RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 TMEM192Q8IY95 271 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ZSWIM2Q8NEG5 633 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ANKRD20A12PQ8NF67 263 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 URGCPQ8TCY9 931 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 HELQQ8TDG4 1101 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 TMEM174Q8WUU8 243 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 HERVK_113Q902F9 699 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 EEF2KMTQ96G04 330 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 SNX27Q96L92 541 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 CNOT6LQ96LI5 555 aaKnown RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 RNPC3Q96LT9 517 aaKnown RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 MED15Q96RN5 788 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 FNBP1Q96RU3 617 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 SLC9A7Q96T83 725 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 DUSP9Q99956 384 aaKnown RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ZBED2Q9BTP6 218 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 MKNK1Q9BUB5 465 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 RNF39Q9H2S5 420 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 THAP9Q9H5L6 903 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 CBX8Q9HC52 389 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 METTL14Q9HCE5 456 aaKnown RBP7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 DMAC2Q9NW81 257 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 KLK14Q9P0G3 267 aa7.17□□□□□ -1.26
CHRNA3-204ENST00000559002 ARMCX3Q9UH62 379 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms