RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MMP3P08254 477 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 MYOGP15173 224 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 RXRAP19793 462 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 TRHRP34981 398 aaPredicted RBP8.46□□□□□ -1.06
SPG11-213ENST00000558988 NT5C2P49902 561 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 HK2P52789 917 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 ANTXR2P58335 489 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 SSPNQ14714 243 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 CCDC85BQ15834 202 aaPredicted RBP8.46□□□□□ -1.06
SPG11-213ENST00000558988 PTGISQ16647 500 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 ZNF605Q86T29 641 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 ZDHHC14Q8IZN3 488 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 RGS22Q8NE09 1264 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 CTCFLQ8NI51 663 aaPredicted RBP8.46□□□□□ -1.06
SPG11-213ENST00000558988 HERVK_113Q902F9 699 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 SGPP1Q9BX95 441 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 GCM1Q9NP62 436 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 ANO2Q9NQ90 1003 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 MAPK8IP1Q9UQF2 711 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 MYO9BQ13459 2157 aa8.46□□□□□ -1.06
SPG11-213ENST00000558988 GCOM1H8Y6P7 765 aaPredicted RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 RFXAPO00287 272 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 PRC1O43663 620 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 KPNA6O60684 536 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 EIF3JO75822 258 aaKnown RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 HPXP02790 462 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 POLR2MP0CAP2 368 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 ATP2A2P16615 1042 aaKnown RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 CASTP20810 708 aaKnown RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 HSD17B4P51659 736 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 SP4Q02446 784 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 ARHGAP1Q07960 439 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 RAB30Q15771 203 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 SLC35G1Q2M3R5 365 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 ZC3H12AQ5D1E8 599 aaKnown RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 CCDC62Q6P9F0 684 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 CASC1Q6TDU7 716 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 UBE3DQ7Z6J8 389 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 DHX37Q8IY37 1157 aaKnown RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 RPUSD2Q8IZ73 545 aaKnown RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 ZNF654Q8IZM8 581 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 CCDC82Q8N4S0 544 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 IWS1Q96ST2 819 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 PDCD2LQ9BRP1 358 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 SEZ6LQ9BYH1 1024 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 LRRC2Q9BYS8 371 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 CERS4Q9HA82 394 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 SLC28A3Q9HAS3 691 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 DDX41Q9UJV9 622 aaKnown RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 YBX2Q9Y2T7 364 aaKnown RBP8.45□□□□□ -1.06
SPG11-213ENST00000558988 GBF1Q92538 1859 aa8.45□□□□□ -1.06
SPG11-213ENST00000558988 MYH7BA7E2Y1 1941 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 KIAA1217Q5T5P2 1943 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 SCN10AQ9Y5Y9 1956 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 PNMA6FA0A0J9YX94 578 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 hCG_1642624A0A1W2PR95 340 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 CCDC69A6NI79 296 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 CYTH3O43739 400 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 GGPS1O95749 300 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 IQCF3P0C7M6 154 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 ACTN1P12814 892 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 CCND2P30279 289 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 BFSP2Q13515 415 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 PGM5Q15124 567 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 DGKDQ16760 1214 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 RASIP1Q5U651 963 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 NFRKBQ6P4R8 1299 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 MB21D2Q8IYB1 491 aaPredicted RBP8.44□□□□□ -1.06
SPG11-213ENST00000558988 C7orf31Q8N865 590 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 USP38Q8NB14 1042 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 SMARCC2Q8TAQ2 1214 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 MAP4K1Q92918 833 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 CLP1Q92989 425 aaKnown RBP8.44□□□□□ -1.06
SPG11-213ENST00000558988 RRP36Q96EU6 259 aaKnown RBP8.44□□□□□ -1.06
SPG11-213ENST00000558988 SPATA33Q96N06 139 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 HDAC6Q9UBN7 1215 aa8.44□□□□□ -1.06
SPG11-213ENST00000558988 SEC63Q9UGP8 760 aaKnown RBP8.44□□□□□ -1.06
SPG11-213ENST00000558988 NAP1L2Q9ULW6 460 aaPredicted RBP8.44□□□□□ -1.06
SPG11-213ENST00000558988 TRIP12Q14669 1992 aaPredicted RBP8.43□□□□□ -1.06
SPG11-213ENST00000558988 NOP56O00567 594 aaKnown RBP8.43□□□□□ -1.06
SPG11-213ENST00000558988 SLC27A2O14975 620 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 PLEKHA8P1O95397 391 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 UBA1P22314 1058 aaKnown RBP8.43□□□□□ -1.06
SPG11-213ENST00000558988 KIF5BP33176 963 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 MCM5P33992 734 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 ZNF200P98182 395 aaPredicted RBP8.43□□□□□ -1.06
SPG11-213ENST00000558988 TROAPQ12815 778 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 KIAA0753Q2KHM9 967 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 TMEM164Q5U3C3 297 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 KIAA0319Q5VV43 1072 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 TMCO2Q7Z6W1 182 aaPredicted RBP8.43□□□□□ -1.06
SPG11-213ENST00000558988 MICU3Q86XE3 530 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 IGDCC4Q8TDY8 1250 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 KAT2BQ92831 832 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 KCNB2Q92953 911 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 CUL5Q93034 780 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 MTMR8Q96EF0 704 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 TCEANC2Q96MN5 208 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 RIOX1Q9H6W3 641 aa8.43□□□□□ -1.06
SPG11-213ENST00000558988 MLXIPQ9HAP2 919 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms