RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 FAM102BQ5T8I3 360 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 FERMT3Q86UX7 667 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 ATCAYQ86WG3 371 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 EXOC8Q8IYI6 725 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 IGSF22Q8N9C0 903 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 ERMNQ8TAM6 284 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 ASAP3Q8TDY4 903 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 PHACTR1Q9C0D0 580 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 ELAC1Q9H777 363 aaKnown RBP6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 ATP6V0A4Q9HBG4 840 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 TMEM161AQ9NX61 479 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 KLK14Q9P0G3 267 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 MUC3AQ02505 3323 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 PLXNA4Q9HCM2 1894 aa6.69□□□□□ -1.34
CTDSPL2-204ENST00000558966 PP2D1A8MPX8 630 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 H3BNC9 293 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 K7ELQ4 463 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 LAD1O00515 517 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 USO1O60763 962 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 SRGAP2CP0DJJ0 459 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 XRCC6P12956 609 aaKnown RBP eCLIP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 ZNF16P17020 682 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 SFPQP23246 707 aaKnown RBP eCLIP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 ARL2P36404 184 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 BMPR1AP36894 532 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 PRPHP41219 470 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 ATP2C1P98194 919 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 CAPSQ13938 189 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 PDIA5Q14554 519 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 HAUS3Q68CZ6 603 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 CATSPER4Q7RTX7 472 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 ECHDC2Q86YB7 292 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 RNF149Q8NC42 400 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 TCP11Q8WWU5 503 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 MYO19Q96H55 970 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 MMTAG2Q9BU76 263 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 INO80BQ9C086 356 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 GPRC5CQ9NQ84 441 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 LMCD1Q9NZU5 365 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 LRWD1Q9UFC0 647 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 DBR1Q9UK59 544 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 PIN4Q9Y237 131 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 PCDHB7Q9Y5E2 793 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 A0A0U1RQF3 1178 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 VPS37CA5D8V6 355 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 TBKBP1A7MCY6 615 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 GRM6O15303 877 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 ASAP2O43150 1006 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 RB1P06400 928 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 ZSCAN20P17040 1043 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 MUTP22033 750 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 GLRA2P23416 452 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 CDC25AP30304 524 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 TXLNAP40222 546 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 CCT6AP40227 531 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 PHKA2P46019 1235 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 PLA2G4AP47712 749 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 PTENP60484 403 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 GPM6BQ13491 265 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 MXD4Q14582 209 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 CLLU1OSQ5K130 101 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 SRGAP1Q7Z6B7 1085 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 SNX29Q8TEQ0 813 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 MRPL38Q96DV4 380 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 INTS4Q96HW7 963 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 CCDC43Q96MW1 224 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 CASD1Q96PB1 797 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 NACC1Q96RE7 527 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 POLR3FQ9H1D9 316 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 POLMQ9NP87 494 aaPredicted RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 CHST12Q9NRB3 414 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 AGPAT5Q9NUQ2 364 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 DDX19AQ9NUU7 478 aaKnown RBP6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 RWDD3Q9Y3V2 267 aa6.68□□□□□ -1.34
CTDSPL2-204ENST00000558966 MEIS3P2A8K0S8 358 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 CAPN5O15484 640 aaPredicted RBP6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 FZD6O60353 706 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 ITGB1P05556 798 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 PDCP20941 246 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 SYT1P21579 422 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 HOXA11P31270 313 aaPredicted RBP6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 CTSOP43234 321 aaPredicted RBP6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 PRR20EP86478 221 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 PRR20CP86479 221 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 PRR20DP86480 221 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 PRR20BP86481 221 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 PRR20AP86496 221 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 MBTD1Q05BQ5 628 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 POU5F1BQ06416 359 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 RESTQ13127 1097 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 CAMK1Q14012 370 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 UBXN11Q5T124 520 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 TWF2Q6IBS0 349 aaKnown RBP6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 DTHD1Q6ZMT9 781 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 LRRC55Q6ZSA7 311 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 MAEAQ7L5Y9 396 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 TMC7Q7Z402 723 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 KCNK18Q7Z418 384 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 BRAPQ7Z569 592 aa6.67□□□□□ -1.34
CTDSPL2-204ENST00000558966 RNF169Q8NCN4 708 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms