RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 NPTX2P47972 431 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 PPP2R5AQ15172 486 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 NAALADL2Q58DX5 795 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 ARL6IP4Q66PJ3 421 aaKnown RBP13.23□□□□□ -0.29
TPM1-216ENST00000558910 CDCA2Q69YH5 1023 aaPredicted RBP13.23□□□□□ -0.29
TPM1-216ENST00000558910 USP49Q70CQ1 688 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 MRPL10Q7Z7H8 261 aaKnown RBP13.23□□□□□ -0.29
TPM1-216ENST00000558910 GPBP1Q86WP2 473 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 VPS52Q8N1B4 723 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.23□□□□□ -0.29
TPM1-216ENST00000558910 LRRC15Q8TF66 581 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 KIFAP3Q92845 792 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 PPP2R3CQ969Q6 453 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 PABPC5Q96DU9 382 aaKnown RBP13.23□□□□□ -0.29
TPM1-216ENST00000558910 INTS4Q96HW7 963 aaKnown RBP13.23□□□□□ -0.29
TPM1-216ENST00000558910 EPSTI1Q96J88 318 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 USP28Q96RU2 1077 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 PDZD7Q9H5P4 517 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 KMT5AQ9NQR1 393 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 PLXNA4Q9HCM2 1894 aa13.23□□□□□ -0.29
TPM1-216ENST00000558910 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.22□□□□□ -0.29
TPM1-216ENST00000558910 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.22□□□□□ -0.29
TPM1-216ENST00000558910 K7ERI5 159 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 GALTP07902 379 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 SSTR3P32745 418 aaPredicted RBP13.22□□□□□ -0.29
TPM1-216ENST00000558910 PPM1AP35813 382 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 MATR3P43243 847 aaKnown RBP eCLIP13.22□□□□□ -0.29
TPM1-216ENST00000558910 POU5F1BQ06416 359 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 DMP1Q13316 513 aaPredicted RBP13.22□□□□□ -0.29
TPM1-216ENST00000558910 CSPP1Q1MSJ5 1256 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 NT5DC1Q5TFE4 455 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 C1orf186Q6ZWK4 172 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 HACE1Q8IYU2 909 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 DAW1Q8N136 415 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 RPS6KC1Q96S38 1066 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 TCHPQ9BT92 498 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 TRAIPQ9BWF2 469 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 NT5C3AQ9H0P0 336 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 CXCL16Q9H2A7 254 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 FZD8Q9H461 694 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 FAN1Q9Y2M0 1017 aa13.22□□□□□ -0.29
TPM1-216ENST00000558910 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 A0A1B0GUA9 196 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 ACKR2O00590 384 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 NRP1O14786 923 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 N4BP3O15049 544 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 TBX10O75333 385 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 BMP15O95972 392 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 ALDH2P05091 517 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 LONP1P36776 959 aaKnown RBP13.21□□□□□ -0.29
TPM1-216ENST00000558910 LTBRP36941 435 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 SLC12A3P55017 1021 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 STK38Q15208 465 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 TMEM119Q4V9L6 283 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 GLRA4Q5JXX5 417 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 ATF7IP2Q5U623 682 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 CNNM3Q8NE01 707 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 HASPINQ8TF76 798 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 SNX21Q969T3 373 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 CCDC51Q96ER9 411 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 IGSF21Q96ID5 467 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 B3GALT6Q96L58 329 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 DRC1Q96MC2 740 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 ADPGKQ9BRR6 497 aa13.21□□□□□ -0.29
TPM1-216ENST00000558910 TARS2Q9BW92 718 aaKnown RBP13.21□□□□□ -0.29
TPM1-216ENST00000558910 ATG2AQ2TAZ0 1938 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 CASTOR2A6NHX0 329 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 RECQL4O94761 1208 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 FAM13AO94988 1023 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 SP100P23497 879 aaPredicted RBP13.2□□□□□ -0.3
TPM1-216ENST00000558910 PLCB3Q01970 1234 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 UBE3AQ05086 875 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 MAPK7Q13164 816 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 ADAM15Q13444 863 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 PKP1Q13835 747 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
TPM1-216ENST00000558910 PTPAQ15257 358 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 SEZ6Q53EL9 994 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 FAM43BQ6ZT52 329 aaPredicted RBP13.2□□□□□ -0.3
TPM1-216ENST00000558910 DYMQ7RTS9 669 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 TAS1R1Q7RTX1 841 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 GLYCTKQ8IVS8 523 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 MYCT1Q8N699 235 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 PDILTQ8N807 584 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 CEP120Q8N960 986 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 SYT2Q8N9I0 419 aaPredicted RBP13.2□□□□□ -0.3
TPM1-216ENST00000558910 BICD1Q96G01 975 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 ZBTB45Q96K62 511 aaPredicted RBP13.2□□□□□ -0.3
TPM1-216ENST00000558910 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 CCDC113Q9H0I3 377 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 UBN1Q9NPG3 1134 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 ANKFY1Q9P2R3 1169 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
TPM1-216ENST00000558910 C5orf42Q9H799 3197 aa13.2□□□□□ -0.3
TPM1-216ENST00000558910 TNFRSF10AO00220 468 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 FSCN2O14926 492 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 GLP2RO95838 553 aa13.19□□□□□ -0.3
TPM1-216ENST00000558910 EFNA5P52803 228 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms