RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 ANKRD13CQ8N6S4 541 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 APPBP2Q92624 585 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 KISS1RQ969F8 398 aaPredicted RBP5.05□□□□□ -1.6
SPG11-211ENST00000558561 GCC1Q96CN9 775 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 IPO9Q96P70 1041 aaKnown RBP5.05□□□□□ -1.6
SPG11-211ENST00000558561 FSD1Q9BTV5 496 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 CRNKL1Q9BZJ0 848 aaKnown RBP5.05□□□□□ -1.6
SPG11-211ENST00000558561 DHX36Q9H2U1 1008 aaKnown RBP5.05□□□□□ -1.6
SPG11-211ENST00000558561 CRTAC1Q9NQ79 661 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 PDLIM7Q9NR12 457 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.05□□□□□ -1.6
SPG11-211ENST00000558561 RBPJLQ9UBG7 517 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 SERPINB13Q9UIV8 391 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 ZBTB21Q9ULJ3 1066 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 PTPN22Q9Y2R2 807 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 MRPS23Q9Y3D9 190 aaKnown RBP5.05□□□□□ -1.6
SPG11-211ENST00000558561 PCDHA2Q9Y5H9 948 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 NPFFR2Q9Y5X5 522 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 MRPL42Q9Y6G3 142 aaKnown RBP5.05□□□□□ -1.6
SPG11-211ENST00000558561 LAMB1P07942 1786 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 DDX60LQ5H9U9 1706 aaKnown RBP5.05□□□□□ -1.6
SPG11-211ENST00000558561 RLFQ13129 1914 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 MGAMO43451 1857 aa5.05□□□□□ -1.6
SPG11-211ENST00000558561 KIAA0100Q14667 2235 aaKnown RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 MAST2Q6P0Q8 1798 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 MPHOSPH10O00566 681 aaKnown RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 FGAP02671 866 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 FUCA1P04066 466 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 APPP05067 770 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 EEF2P13639 858 aaKnown RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 BCL6P41182 706 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 PSMC4P43686 418 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 SNAP25P60880 206 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 HAND2P61296 217 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 SUMO1P63165 101 aaKnown RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 PTH1RQ03431 593 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 KCNAB2Q13303 367 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 TESK1Q15569 626 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 MPZL3Q6UWV2 235 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 PRR23BQ6ZRT6 265 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 NOP9Q86U38 636 aaKnown RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 SPICE1Q8N0Z3 855 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 LZTR1Q8N653 840 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 ZSWIM2Q8NEG5 633 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 DCAF4Q8WV16 495 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 INTS4Q96HW7 963 aaKnown RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 NUP88Q99567 741 aaPredicted RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 MTA3Q9BTC8 594 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 PHF20Q9BVI0 1012 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 KRTAP9-2Q9BYQ4 174 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 IL17RBQ9NRM6 502 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 ATP8A2Q9NTI2 1148 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 FBXO28Q9NVF7 368 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 BTBD7Q9P203 1132 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 HERC5Q9UII4 1024 aaKnown RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 FBXL7Q9UJT9 491 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 GJD2Q9UKL4 321 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 TRAF6Q9Y4K3 522 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 TIMM13Q9Y5L4 95 aaPredicted RBP5.04□□□□□ -1.6
SPG11-211ENST00000558561 NAV1Q8NEY1 1877 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 PLXNB2O15031 1838 aa5.04□□□□□ -1.6
SPG11-211ENST00000558561 MYH8P13535 1937 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 A0A1W2PQJ5 194 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 ESYT3A0FGR9 886 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
SPG11-211ENST00000558561 HLA-DOAP06340 250 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 C6orf222P0C671 652 aaPredicted RBP5.03□□□□□ -1.6
SPG11-211ENST00000558561 HSPD1P10809 573 aaKnown RBP5.03□□□□□ -1.6
SPG11-211ENST00000558561 EN2P19622 333 aaPredicted RBP5.03□□□□□ -1.6
SPG11-211ENST00000558561 CORO7P57737 925 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 RPL11P62913 178 aaKnown RBP5.03□□□□□ -1.6
SPG11-211ENST00000558561 LACTBP83111 547 aaPredicted RBP5.03□□□□□ -1.6
SPG11-211ENST00000558561 SBK1Q52WX2 424 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 ZC3H12BQ5HYM0 836 aaKnown RBP5.03□□□□□ -1.6
SPG11-211ENST00000558561 ADGRF1Q5T601 910 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 BICRALQ6AI39 1079 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 OTUD7BQ6GQQ9 843 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 CWC27Q6UX04 472 aaKnown RBP5.03□□□□□ -1.6
SPG11-211ENST00000558561 CATSPERGQ6ZRH7 1159 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 C16orf86Q6ZW13 317 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 CEP68Q76N32 757 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 TEX2Q8IWB9 1127 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 PLEKHO2Q8TD55 490 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 USP33Q8TEY7 942 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 EVI5LQ96CN4 794 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 HOOK2Q96ED9 719 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 DIRC2Q96SL1 478 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.03□□□□□ -1.6
SPG11-211ENST00000558561 PORCNQ9H237 461 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 RXFP1Q9HBX9 757 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 GPR27Q9NS67 375 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 MARCH2Q9P0N8 246 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 CLIP2Q9UDT6 1046 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 AGTPBP1Q9UPW5 1226 aa5.03□□□□□ -1.6
SPG11-211ENST00000558561 IGKV6D-41A0A0C4DH26 115 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 C22orf46C9J442 243 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 PPP1R12AO14974 1030 aaPredicted RBP5.02□□□□□ -1.61
SPG11-211ENST00000558561 ERC2O15083 957 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 ASNSP08243 561 aa5.02□□□□□ -1.61
SPG11-211ENST00000558561 FPR2P25090 351 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms